Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01367 ATGGTAGATTACGTGAGAGGAAAAGGGGAAAAACAAAAAGAAAGAAAGGAAAAAGGGTCAATTCAGAGGTTAGTCGCTCGACGACTAAAACCCCACCTAAGAAATCTTAGAAAGAAACAATCAGGAACGGATGGATTTCTCCATTTGCCTGATCATCTCGGAAAACAATCACCAGAATCTAGGGCAAGGGCTTTTCTTTTCAAATTTAAAAGCTCCTTCTGGATCTCCCCTTTACTTCGAATTGCAACAATCGAGATTATAGAAGGGGACTGGTTCAACTACCTGCTGAAGTGTAGGAGAGGCTCTCAGTGGCAGCGAATGAAATGGACTGATGATGTGATTCGGCTTCTTATAGCAGTAGTTGCTCATGTAGGCGACGATGGTGAAGGCTGGGAGGGCCTCAAGAGAAAATCAGGGATCTTACAAAAGAAGGGTAAATGGAAAATGGTTTCGAAAGTAATGATAAGTAAGGGATGCTATGTTTCTCCACAGCAATGGGAGGATAAGTTTAATGACTTGAACAAGAGGTATAAACGATTAAACGATATTCTAGGGCGAGGAACAAGTTGCAGAGTTGTGGAGAACCCTTCTCTTATGGATTCTATGCCACATATTTCAGCAAAGGCAAAAGACGTTGTGAAGAAGATTTTGAGCTCCAAACACTTATTTTACAAGGAAATGTGTGCGTACCATAATGGCCAGAAGATACCCGATTTCCATGGTCTTGATCTACAGAATTTTTCTTTACCAGATGGAGGTCGCTGTAGAGAGAGTAATAACTCAGAGAAAGAGGCTGTCAGTGATGATGATGATGATGATGAATCAGATGATGAAAATGACGATCTATACGATCCGGATAGAGGGAGGATGGTTGAATATGGACAGAGGGAGAGGGCGGCCAAAGAGGATGGACACATGTGGCAGCATCGTATTGGACAAGAATGTTTTTCATTAGAAATGGCAGTTCGGCCAGTTTTGGTGGCTAGCGCAGGCCTCGACTCAGAAGAGGCCAAGCTGCGGCCTGGGCCTTTTGGACTTGGCGAGCGGCTACTCGGTCATGCCAAAGTCACTGCCTCCCCCTTGCAAGATTGGAACTTGATTACTAACCAAGGAGGAAATGAAGTTCCAAAGGTGGCTGATTTTCTTGGGGTTACCAAATCAGAAAATCAATCAGATCTAGTGGTTTTTAATGAGATTCAGTCAAATGATTCAGACTATCTATATTCAAACAACAGCATAGTTCCTCTTCAAAACACCATGGCTGATTTCCAAGAAAGCTCTAACCATTTGCAGTCTTTGACTTTGACAATGGGGAGTGGAAATAAAGGTTCGGCAGCGTGTGAAAATAGCGAAAACAGCACAAACAGTATTGTTGAGGCAACTCCGAGAAGAACTATGGAGACTCTCGGGCAAAGAACTTCAATTTATCGTGGGGTTACTAGGCATAGATGGACAGGAAGATATGAAGCCCATCTTTGGGATAATAGTTGTAGAAGGGAAGGACAATCAAGAAAGGGTCGTCAAGGTGGGTATGACAAAGAAGATAAAGCAGCCAGGGCTTATGATCTTGCTGCGCTGAAATATTGGGGAACATCAACGACCACTAATTTCCCAGTAAGCAATTATGAAAAAGAAGTGGAAGAGATGAAGCACATGACGAGACAAGAATTTGTAGCCTCCATTAGAAGGAAGAGTAGTGGCTTTTCTAGAGGCGCATCCATGTATCGTGGAGTTACAAGGCAAACAATACCTCTCTCTTCTCTCTCTCTCACTACACTCTTTCTCTCTCTACTCTCTCTCTCAACCATGTTCATCTGTGTTTACAGGCATCATCAACATGGAAGATGGCAGGCGAGAATAGGAAGAGTTGCTGGAAACAAAGATCTTTACTTGGGAACATTCAGTACCGAGGAAGAAGCTGCAGAAGCATATGATATTGCAGCCATAAAATTTCGAGGCCTAAATGCAGTGACGAACTTCGACATGAATCGGTACGACGTAAAGAGCATTTTGGAAAGCAATACTCTCCCCATCGGAGGAGGAGCAGCCAAACGATTGAAAGAAGCTCAGGCCTTTGAATCAACGAGAAAACGTGAAGAAATGATAGCATTAGGTTCAAGCTTTAGCTATGGCGCCGCCAGTGGATCTTCAACTAGACTTCCTCTTCAATCTTACCCTCTTCTTCAGCAATCTTTTGAGCATTCTCAGCCCTTGATTTCTCTGCAAAATCAAGAAATGTCTCATTTTTCTCAAGACCCATCATCGCTTCAGCAGAGTTATCTTCATCAGCTTCACTTTCATCATCAGAACTCTGGTTTTTATGCAAATCCATTTGGCCAAAGCTCTCAATTCTTCAATGGCTATGTTCAGAATAATCACCCTGGTTTACTTCACGGCTCTGGATCATCTTCTTCTTCTGTGATCATGGAGAATAACTATGGCGGAGGAATATATAATCTCGGAAATGGAGTTCCAATTGCGTCGGTTTCTTCCTCTAATGGCGGTGGAGTAAGATCAGCAGAAGAACTGTCTCTTGTCAAGGTGGATTATGATATGGTTCCTGGAGGATATGGAGGTTGGCCCACTGATCATCAGCCTAACAATGGAGTTTTCTCAATGTGGAATGATGGCTGA 2634 43.05 MVDYVRGKGEKQKERKEKGSIQRLVARRLKPHLRNLRKKQSGTDGFLHLPDHLGKQSPESRARAFLFKFKSSFWISPLLRIATIEIIEGDWFNYLLKCRRGSQWQRMKWTDDVIRLLIAVVAHVGDDGEGWEGLKRKSGILQKKGKWKMVSKVMISKGCYVSPQQWEDKFNDLNKRYKRLNDILGRGTSCRVVENPSLMDSMPHISAKAKDVVKKILSSKHLFYKEMCAYHNGQKIPDFHGLDLQNFSLPDGGRCRESNNSEKEAVSDDDDDDESDDENDDLYDPDRGRMVEYGQRERAAKEDGHMWQHRIGQECFSLEMAVRPVLVASAGLDSEEAKLRPGPFGLGERLLGHAKVTASPLQDWNLITNQGGNEVPKVADFLGVTKSENQSDLVVFNEIQSNDSDYLYSNNSIVPLQNTMADFQESSNHLQSLTLTMGSGNKGSAACENSENSTNSIVEATPRRTMETLGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAYDLAALKYWGTSTTTNFPVSNYEKEVEEMKHMTRQEFVASIRRKSSGFSRGASMYRGVTRQTIPLSSLSLTTLFLSLLSLSTMFICVYRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESNTLPIGGGAAKRLKEAQAFESTRKREEMIALGSSFSYGAASGSSTRLPLQSYPLLQQSFEHSQPLISLQNQEMSHFSQDPSSLQQSYLHQLHFHHQNSGFYANPFGQSSQFFNGYVQNNHPGLLHGSGSSSSSVIMENNYGGGIYNLGNGVPIASVSSSNGGGVRSAEELSLVKVDYDMVPGGYGGWPTDHQPNNGVFSMWNDG 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 40121441 40136121 - BLOR12548 Blo03g01367 58831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01367 877 Gene3D - 109 179 - -
Blo03g01367 877 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 344 581 - -
Blo03g01367 877 MobiDBLite consensus disorder prediction 264 281 - -
Blo03g01367 877 SMART rav1_2 475 544 IPR001471 GO:0003700|GO:0006355
Blo03g01367 877 SMART rav1_2 607 667 IPR001471 GO:0003700|GO:0006355
Blo03g01367 877 PRINTS Ethylene responsive element binding protein signature 520 540 IPR001471 GO:0003700|GO:0006355
Blo03g01367 877 PRINTS Ethylene responsive element binding protein signature 476 487 IPR001471 GO:0003700|GO:0006355
Blo03g01367 877 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 602 875 - -
Blo03g01367 877 Pfam Myb/SANT-like DNA-binding domain 106 229 IPR044822 -
Blo03g01367 877 ProSiteProfiles AP2/ERF domain profile. 574 661 IPR001471 GO:0003700|GO:0006355
Blo03g01367 877 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 344 581 - -
Blo03g01367 877 SUPERFAMILY DNA-binding domain 474 540 IPR016177 GO:0003677
Blo03g01367 877 CDD AP2 609 661 IPR001471 GO:0003700|GO:0006355
Blo03g01367 877 Pfam AP2 domain 475 530 IPR001471 GO:0003700|GO:0006355
Blo03g01367 877 Pfam AP2 domain 604 653 IPR001471 GO:0003700|GO:0006355
Blo03g01367 877 SUPERFAMILY DNA-binding domain 607 662 IPR016177 GO:0003677
Blo03g01367 877 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 602 875 - -
Blo03g01367 877 MobiDBLite consensus disorder prediction 253 289 - -
Blo03g01367 877 Gene3D AP2/ERF domain 475 540 IPR036955 GO:0003700|GO:0006355
Blo03g01367 877 Gene3D AP2/ERF domain 604 663 IPR036955 GO:0003700|GO:0006355
Blo03g01367 877 ProSiteProfiles AP2/ERF domain profile. 475 538 IPR001471 GO:0003700|GO:0006355
Blo03g01367 877 CDD AP2 474 540 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g00992 Blo03g01367 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01367 Blo-Chr3:40121441 Blo10g00974 Blo-Chr10:28913341 2.09E-07 dispersed
Blo08g00468 Blo-Chr8:10549400 Blo03g01367 Blo-Chr3:40121441 6.33E-112 transposed
Blo09g00522 Blo-Chr9:16446321 Blo03g01367 Blo-Chr3:40121441 1.21E-49 transposed
Blo11g00401 Blo-Chr11:3476505 Blo03g01367 Blo-Chr3:40121441 6.10E-115 transposed
Blo12g00789 Blo-Chr12:26294924 Blo03g01367 Blo-Chr3:40121441 8.83E-52 transposed
Blo03g00992 Blo-Chr3:36199389 Blo03g01367 Blo-Chr3:40121441 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12183 PF13837 Myb_DNA-bind_4 4.10E-16 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01367 K09285 - pvy:116115844 652.514