Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g01379 | ATGCAATCTCAATCTGAAGCCAGAGATAAAGTAGAATCGAGTGCCCATAACATCCCACCAGCCAATAGTTACTTTGAACCTTGGTGGCGTAACGTTGAATACAATTCTATTCCCCCACCCGGGACTGTGGTAAATGCTCCCAACTCTTCTTCAATGGAATGCCTAGACAATTGTTCGGAGTCCAATGATGACCGATCGATCTCTAGTGATGAGCATATTGATGATGATGATAATGCTGATAAACAATCACAGCGAATGGCTGAATCTGCACGTTCTGGTAATATTATAAACATAATAATAATGCAAGATTCGCAAAATGGACCACATGGAGCATCCTCTGGGCCGACAGTGCATGGTGCCTGCATGCCGCAACCTCCATTGCTTGAACTAGTTGGACATTCTATTGCATGTGCTCCGAATCCTTATCAGGATCCATATTATGGAGGAATGATGCCTGCTTATGGACATCAACCTCTGGGTTACCCTCCTGTTCTCGGAATGCCGCATGCTAGAATGCCTTTACCTCATGACATGATACAAGAGCCAGTTTTTGTCAATGCCAAGCAATACCAAGGGATTTTAAGAAGACGACAGGCTCGTGCTAAAGCTGAAGCTGAAAAGAAGCTGATAAAAAATAGGAAGCCGTATCTTCATGAATCTCGGCATAAGCATGCAATGAGAAGAGTAAGGAGTATTGGAGGGCGTTTTGCCAAGAAAGTCGAGGTCGAATCGGCCAACTGCACGTACAAAGAAAAAGGAACAGACCCAGTTCCAGCCCTGTCCTTGCAGTCAGCTTCGGAACTCTCAGCTGCTGACGGGAGTGAAAGATGGACGACAACAAATGGTCAGCAAGCAGCCAGCCGGCCCCAAAAATATGATACCCAAAACATCATTAACCACCAAATTCAGAGTCGCAATGGCCTCTTTGGTGAAACCGGGGAGGAAGGAGACTGCTCGGGCCAGGAACTGGTAAGAATTTCCAGGGACAAGGCTTCACACGGCCGGCGCCTAGCCATACAGTGA | 1023 | 46.63 | MQSQSEARDKVESSAHNIPPANSYFEPWWRNVEYNSIPPPGTVVNAPNSSSMECLDNCSESNDDRSISSDEHIDDDDNADKQSQRMAESARSGNIINIIIMQDSQNGPHGASSGPTVHGACMPQPPLLELVGHSIACAPNPYQDPYYGGMMPAYGHQPLGYPPVLGMPHARMPLPHDMIQEPVFVNAKQYQGILRRRQARAKAEAEKKLIKNRKPYLHESRHKHAMRRVRSIGGRFAKKVEVESANCTYKEKGTDPVPALSLQSASELSAADGSERWTTTNGQQAASRPQKYDTQNIINHQIQSRNGLFGETGEEGDCSGQELVRISRDKASHGRRLAIQ | 340 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 40225072 | 40227385 | + | BLOR12560 | Blo03g01379 | 58843 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g01379 | 340 | ProSiteProfiles | NF-YA/HAP2 family profile. | 179 | 239 | IPR001289 | GO:0003700|GO:0006355 | |
Blo03g01379 | 340 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 | 32 | 329 | - | - | |
Blo03g01379 | 340 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 181 | 236 | IPR001289 | GO:0003700|GO:0006355 | |
Blo03g01379 | 340 | MobiDBLite | consensus disorder prediction | 264 | 294 | - | - | |
Blo03g01379 | 340 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 32 | 329 | IPR001289 | GO:0003700|GO:0006355 | |
Blo03g01379 | 340 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Blo03g01379 | 340 | ProSitePatterns | NF-YA/HAP2 subunit signature. | 184 | 204 | IPR018362 | GO:0003677|GO:0016602 | |
Blo03g01379 | 340 | MobiDBLite | consensus disorder prediction | 58 | 84 | - | - | |
Blo03g01379 | 340 | MobiDBLite | consensus disorder prediction | 43 | 57 | - | - | |
Blo03g01379 | 340 | MobiDBLite | consensus disorder prediction | 43 | 89 | - | - | |
Blo03g01379 | 340 | PRINTS | CCAAT-binding transcription factor subunit B signature | 182 | 204 | IPR001289 | GO:0003700|GO:0006355 | |
Blo03g01379 | 340 | PRINTS | CCAAT-binding transcription factor subunit B signature | 213 | 236 | IPR001289 | GO:0003700|GO:0006355 | |
Blo03g01379 | 340 | Gene3D | - | 179 | 241 | - | - | |
Blo03g01379 | 340 | SMART | cbf3 | 178 | 239 | IPR001289 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo03g01379 | Blo14g00284 | CCT | |
Blo03g01379 | Blo08g00103 | CCT | |
Blo03g01379 | Blo14g00284 | ECH | |
Blo03g01379 | Blo03g00980 | ECH | |
Blo03g01379 | Blo08g00103 | ECH | |
Blo03g00980 | Blo03g01379 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g01379 | Blo-Chr3:40225072 | Blo08g00259 | Blo-Chr8:3301451 | 1.80E-39 | dispersed | |
Blo14g00284 | Blo-Chr14:2845175 | Blo03g01379 | Blo-Chr3:40225072 | 4.34E-87 | wgd | |
Blo03g00980 | Blo-Chr3:35958672 | Blo03g01379 | Blo-Chr3:40225072 | 2.94E-129 | wgd | |
Blo03g01379 | Blo-Chr3:40225072 | Blo08g00103 | Blo-Chr8:1083191 | 1.46E-81 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12184 | PF02045 | CBFB_NFYA | 1.10E-25 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g01379 | K08064 | - | jre:108998712 | 338.576 |