Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01418 ATGGGATTTTGTGGTGATTTGGATTTTTTGTCTGCACCTCCCGGAGAGGGTGATATGGTCGCTCCACCGACCGAACCCGAAGCTACTGTAGAAGATGATTATTCAGATGAAGAAATCGATGTTGATGAGCTCGAGAGGAGGGTGTGGAGGGACAAAATGCGTCTCAAGCGGCTGAAAGAGCAGAGTAAAGGAAAGGAAGGTATCGACATGGCCAAACAGCGCCAATCTCAAGAACAAGCGAGGAGAAAGAAGATGTCTAGGGCCCAAGACGGGATCTTGAAATACATGTTGAAGATGATGGAAGTTTGCAAAGCTCAAGGCTTTGTCTATGGGATTATTCCGGAAAAGGGGAAACCTGTTACAGGGGCATCGGATAATCTTCGAGAATGGTGGAAGGATAAAGTCAGATTCGATCGAAATGGGCCGGCGGCCATAGCCAAGTACCAAGCCGAAAATGCAATTCCATGCAAAAACGAAGGCTCCAACTTGATCGAAGGAGCAAACGATGAGGGAGACTTTGATGTGCAAGATTGTAAAGTGGAGAATCTCAGTTCGATAAGTTTAGGATTGGAAAGAACTCGAGAAAGGTTGCCTAATCGACATTCTTCGCCCTATCCACTCAAAGGAGAAGTCCTTACAAACTTGGATTTTGCGAGGAAGAGAAAGCCATCGGCTGATTTAAACACAATGACTGATCAGAAAATCTACACTTGCGAATTTCTTCAATGTCCTTACAGCGAATGTCAGCTCGGGTTTCGGGACAGGACCTCTAGGGACAATCATCAATTGTCTTGCCCATATAGGACATCTGATTTTGGGAGCTCAAATTTTCAATTCAATGAAGTAAAGCCAGTTATCTTCCAACAATCTTTTGTCCAATCCAAGCCACCCACTCCGGTGTTCGACTTATCTGGGCTCAGAGTTCCAGAAGACGGCCAGAAGCTGATAAGCGAACTCATGTCGATTTACGATACTAGTGTTCAAGGCAGTAAAACTTCAAACACGGGGCCGAATTTGATGACAGATAATCAAACTGCCTCTCATTCTCAGCCGAAGATTCTTCATCAACAAAACGAAATCTTCGCAAATAAAGGCAATTTCTACCAAGAAGCCAATCTTTCAAGTAATCATCAGATGGTTTCTCGAGAAGGTGGAGGCCAATTCAATCAATTCAAACCTTTGAATTCTCCGTTCGAGACCAGCAATGGCAGCAATAATTTTCAGCTGATGTTTGGTTCTCCGTTTGAATTGCCATCGTTCAATTACAAAGACGACGTAGGAGGGGCGGCGACCCATCCGCCCTCGAAGCACCAGGATATTTCAATCTGGTACCAGTAA 1338 44.77 MGFCGDLDFLSAPPGEGDMVAPPTEPEATVEDDYSDEEIDVDELERRVWRDKMRLKRLKEQSKGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQAENAIPCKNEGSNLIEGANDEGDFDVQDCKVENLSSISLGLERTRERLPNRHSSPYPLKGEVLTNLDFARKRKPSADLNTMTDQKIYTCEFLQCPYSECQLGFRDRTSRDNHQLSCPYRTSDFGSSNFQFNEVKPVIFQQSFVQSKPPTPVFDLSGLRVPEDGQKLISELMSIYDTSVQGSKTSNTGPNLMTDNQTASHSQPKILHQQNEIFANKGNFYQEANLSSNHQMVSREGGGQFNQFKPLNSPFETSNGSNNFQLMFGSPFELPSFNYKDDVGGAATHPPSKHQDISIWYQ 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 40764740 40766551 - BLOR12599 Blo03g01418 58882

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01418 445 Coils Coil 27 61 - -
Blo03g01418 445 Pfam Ethylene insensitive 3 42 181 IPR006957 GO:0005634
Blo03g01418 445 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 164 - -
Blo03g01418 445 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 164 444 - -
Blo03g01418 445 MobiDBLite consensus disorder prediction 11 37 - -
Blo03g01418 445 MobiDBLite consensus disorder prediction 60 85 - -
Blo03g01418 445 Gene3D - 74 153 IPR023278 GO:0003700|GO:0005634
Blo03g01418 445 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 164 IPR006957 GO:0005634
Blo03g01418 445 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 164 444 IPR006957 GO:0005634
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01418 K14514 EIN3; ethylene-insensitive protein 3 - zju:107410460 331.643
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00996 Blo-Chr3:36234279 Blo03g01418 Blo-Chr3:40764740 1.60E-53 dispersed
Blo03g00932 Blo-Chr3:35315446 Blo03g01418 Blo-Chr3:40764740 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo03g01418 . 31 186 EIL Transcription Factor Family AT1G73730 58.2 1.0e-42 171.8
Blo03g00932 . 31 160 EIL Transcription Factor Family AT1G73730 64.4 2.0e-41 167.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001004 3 9 2 2 3 2 4 2 2 1 2 2 4 2 2 4 2 6 4 2 2 2 2 2 2 2 2 3 4 2 83
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12186 PF04873 EIN3 1.30E-56 No_clan Blo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g01418 Blo_Chr03 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0