Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01423 ATGATGTTATCCGCCTCACCTTCTACGATTATTCGGAGCTCGCTCGAGGAAATGCTGGATTCTCTCAGGCGGAGAGACGAGAACGAGAAGGCTAAAGACTTGCCTCCGGCTTTGCCAGCTCGGCCTAACTCAAAGAGTCGTCTTCCTCCAGCTAGGAGATCTTTACCTGTAAATTTTAAGGTAGGGGATGAGGGTATTCCAGAATGCTCTGTCAGTGGGTTTCATGAGAAGGAAGAGACAAAGAGGAAAGAGAAGAATTTGGAAAGCAAAGGAGGTAGCTTTGGGAGTAAGAGGCTGAAGAAAGATCAAAATGATGAATCGCCGTACGTTTTAGCTCTAGAAAACTGTAGAATTTATCATATGGAGGAATCTTATGGTGGTGGTGCTGCTTCACCGAAAAAAGTAGAAGATTCAGATTGGGACGACAACATTAGTTATTTTATTAAGAAGAAACTTCGTGTGTGGTGTCACCTCCCAAATAGAAAGTGGGAACTAGGAACTATACAATCATCTACTGGGGAGGAAGCAGTTGTTCTGCTCTCAAAGGGAAATGTTATGAAAGTTTCCACGGCACAGCTCTTACCTGCTAACCCAGATCTCTTGGAAGGGGTTGATGATCTCATACAACTTAGTTATTTAAACGAACCATCAGTTCTTTACAACCTCCGGCAGAGATTTTCTCAGAATAAAATTTATAGTAAGGCAGGGCCAGTAACGATTGCTATCAATCCCTTCAAAGATGTTGGTTGTTACGGAAATGATGTTGTTATGGCTTATAGAAAGAAGCTCATGGACAGCCCTCATATTTATGCTACAGCAGACGCTGCCTACAATGAGATGTTGACAGATGGGATTAATCAATCCATTATCATAAGTGGAGAAAGTGGAGCTGGGAAGACTGAGACTGCAAAAGTTGCCATGCAATACTTGGCTTCCCTAGGTGGTGGAAGTTTAGGGGTGGAGAATGGAATACTGCAAACAAATTCTATACTGGAAGCATTTGGAAATGCTAAAACATCTAGGAATGACAATTCCAGTCGATTTGGGAAGTTGATAGAAATTCATTTTAGTACACCTGGGAAGATGTGTGGTGCAAAAATCCAAACTTCGTGCTTTATAATTGCTTCCTTTGAGCAGTCAAGAGTTGTTCATCTGGCCCAAGGCGAGCGGTCATACCATATCTTTTATCAACTTTGTGCTGGAGCCTCGCCATCTCTTAAAGGGACACTGAACCTCAAAGAGGCCAGTGGATACAAGTACCTCAATCAGAGTGAGTGCCTAATGATTGATGGTGTTGATGATGCGCAAAAATTTAATATTCTCAAGGAAGCTTTGAACACCGTTAAAATCTGCAGTGAGGATCAAGAACATGCATTTTCTATGCTTGCTGCAGTTTTATGGTTAGGCAACATATCATTTCAAGCAATTGATAGTGAAAATCAAGTGGAGGTGCTTGCTGATGAAGCTCTAACAAATGCAGCAAAGCTGATTGGTTGCAGTTACCAAGAGCTAATGATAGTTTTATCGACCCAAAATATTCAAGCGGGAAAGGATTCCATTGCCAAAAAATTGACATTGCAACAGGCAATAGACACCAGAGATGCATTAGCAAAGTTTATCTATTCAAGCTTGTTTGAGTGGCTCGTGGAACAAATAAACAAGTCACTTGCAGTGGGAAAACGCCACACTGAAAGATCTATAAGTATTCTTGACATTTGTGGGTTTGAGTCATTTAAGAAAAATAGCTTAGAACAATTTTGTATAAATTATGCAAACGAGAGGCTGCAACAACATTTTATCCGTCACGTCTTCAAACTTGAACAGGAGTTGTATTATGATTATGAAGTGGATGGAATCGATTGGACTAAAGTTGATTTTGAAGATAACCAAGAATGTTTAAATCTTATTGAAAAGAAACCTCTAGGTATTCTAGCTTTGTTGGATGAGGAATCAAAATTTCCTAAGGCTACTGACCTTACATTTGCGAATAAACTTAAACATCATTTGAATGTGAATTCTTGCTTTAAAGGAGAAAGGGGGCGGGCTTTTGGTGTTCATCACTATGCTGGAGAGGTTGTATATGATACAAATGGATTTCTGGAGAAAAATAGAGATCCGTTGCCCACAGAATCCATTCAGTTTGTTGCATCATGTAGTTCCAAATTACCACAGTTGTTTGCCTCAAAATTACTTTCTCACAAAGCAGCAAGTTCTCAAGGTCGTACGGGTACTTTGGAATCTCCAAAGCTGAGTGCTGGTACAAAGTTCAAGTATCAACTATATAAGTTAATGCATCACTTGGAGAACACCAGTCCTCACTTCATTCGCTGCATAAAGCCAAATAGCAATCAGGCTCCTGGCTCATACGAAGAAGACTTGGTCTTGCAACAACTAAGGTGTTGTGGGGTTCTAGAGGTTGTTAGAATTGCAAGATCTGGCTATCCCACACGAATACCCCATCAAGAGTTTGCTAGGAGGTATGGTTTCTTGCTTAGAGAAACCGGTGTGTCTCAGGATCCGTTAAGTATATCTGTCGCTGTTTTACAACAGTTCAATATCCTCCCTGAAATGTTCCAAGTTGGCTACACAAAATTATTTCTTAGAACAGGGCAGATTGGGGCATTGGAGGAAAGAAGGAAACAGGTTTTGAATGGAATAGTTGGAATGCAAAAATCCTTTCGGGGACTCCTTGCACGTCGTCATTTCCGCAACCTCAAGAATGAAGCCATGATGCTACAATCATTCATTCGAGGCGAAAATGTCAGGAGAGAATACAATGTCACGTTGAAGTCATCTGCAGCTAGTGTTACTAGAACAAATAACGAGCTGGAAACAATTATACGTTTACAATCTGTGATTCGTGGTTGGCTTGTCCGAAGGCATTGTAGTGGGATGCAAGATCTGCATAAGTTAAGAAGTGAAAGTGTAAAATCTAAATTAAAGCAGGGTCCGAGGATTTCGGAAGTTATGCCACAAGAACAGTTGGATGTTTTACCAACGGTTTTGTCTGAGCTTCAAGTGCGGGTCCTGAAGGCAGAATCAGCACTGGAGAAAAAGGAAGAGGAAAATGCTGCATTACGAGATCAAGTACGACAATATGAGGTTAGGTGGACAGAATATGACGCAAAGATGAAATCTATGGAGGAGATATGGCAAAAGCAAATGACATCTCTCCAAATGAGTCTTGTTGCTGCAAAAAAGAGCTTGATTACTGACCAAACTCCTGTTCAACCCATCAAAATCGAAGCTATGTCACCATCTCGTTATTATGATTCTGAGGATACGACATCAATGGGATCTCGAACTCCTGGTGCAAGTACACCGATAAAATATTCTACCATTCCTGAAATAGGAACTTTGCGAGACACTCATGGTACTTTGGCTGCAGTAAGCAATCTGGCAAAGGAATTTGAGCAGCAGAGACACACCTTTGACGATGATGCACAAGCTTTAGTACAAGTAAAAACCGGCCAATTGGAAACGAGTTGGCAGCCTTATGCGGAGCTTCGGAAACTTAAAAAACATTTTAAGACTTGGAAGAAAGACTATAAGGCCAGACTTAGGGAAGCAAAAGTCAAGCTTCAGAAACTTGGTCATGTAGATGCTGACAGGAGTCGTCGGAAATGGTGGGGGAAATTGCGCTAA 3645 41.12 MMLSASPSTIIRSSLEEMLDSLRRRDENEKAKDLPPALPARPNSKSRLPPARRSLPVNFKVGDEGIPECSVSGFHEKEETKRKEKNLESKGGSFGSKRLKKDQNDESPYVLALENCRIYHMEESYGGGAASPKKVEDSDWDDNISYFIKKKLRVWCHLPNRKWELGTIQSSTGEEAVVLLSKGNVMKVSTAQLLPANPDLLEGVDDLIQLSYLNEPSVLYNLRQRFSQNKIYSKAGPVTIAINPFKDVGCYGNDVVMAYRKKLMDSPHIYATADAAYNEMLTDGINQSIIISGESGAGKTETAKVAMQYLASLGGGSLGVENGILQTNSILEAFGNAKTSRNDNSSRFGKLIEIHFSTPGKMCGAKIQTSCFIIASFEQSRVVHLAQGERSYHIFYQLCAGASPSLKGTLNLKEASGYKYLNQSECLMIDGVDDAQKFNILKEALNTVKICSEDQEHAFSMLAAVLWLGNISFQAIDSENQVEVLADEALTNAAKLIGCSYQELMIVLSTQNIQAGKDSIAKKLTLQQAIDTRDALAKFIYSSLFEWLVEQINKSLAVGKRHTERSISILDICGFESFKKNSLEQFCINYANERLQQHFIRHVFKLEQELYYDYEVDGIDWTKVDFEDNQECLNLIEKKPLGILALLDEESKFPKATDLTFANKLKHHLNVNSCFKGERGRAFGVHHYAGEVVYDTNGFLEKNRDPLPTESIQFVASCSSKLPQLFASKLLSHKAASSQGRTGTLESPKLSAGTKFKYQLYKLMHHLENTSPHFIRCIKPNSNQAPGSYEEDLVLQQLRCCGVLEVVRIARSGYPTRIPHQEFARRYGFLLRETGVSQDPLSISVAVLQQFNILPEMFQVGYTKLFLRTGQIGALEERRKQVLNGIVGMQKSFRGLLARRHFRNLKNEAMMLQSFIRGENVRREYNVTLKSSAASVTRTNNELETIIRLQSVIRGWLVRRHCSGMQDLHKLRSESVKSKLKQGPRISEVMPQEQLDVLPTVLSELQVRVLKAESALEKKEEENAALRDQVRQYEVRWTEYDAKMKSMEEIWQKQMTSLQMSLVAAKKSLITDQTPVQPIKIEAMSPSRYYDSEDTTSMGSRTPGASTPIKYSTIPEIGTLRDTHGTLAAVSNLAKEFEQQRHTFDDDAQALVQVKTGQLETSWQPYAELRKLKKHFKTWKKDYKARLREAKVKLQKLGHVDADRSRRKWWGKLR 1214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 40799765 40809453 + BLOR12604 Blo03g01423 58887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01423 1214 Gene3D - 886 935 - -
Blo03g01423 1214 Gene3D - 813 881 - -
Blo03g01423 1214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 927 IPR027417 -
Blo03g01423 1214 SMART MYSc_2a 196 881 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo03g01423 1214 ProSiteProfiles IQ motif profile. 905 934 IPR000048 GO:0005515
Blo03g01423 1214 ProSiteProfiles IQ motif profile. 942 970 IPR000048 GO:0005515
Blo03g01423 1214 ProSiteProfiles Myosin motor domain profile. 202 880 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo03g01423 1214 Gene3D Myosin VI head, motor domain, U50 subdomain 451 739 - -
Blo03g01423 1214 MobiDBLite consensus disorder prediction 70 101 - -
Blo03g01423 1214 CDD MYSc_Myo8 216 868 IPR036022 -
Blo03g01423 1214 PANTHER MYOSIN-2 ISOFORM X1 35 1213 - -
Blo03g01423 1214 ProSiteProfiles IQ motif profile. 884 910 IPR000048 GO:0005515
Blo03g01423 1214 SMART iq_5 904 926 IPR000048 GO:0005515
Blo03g01423 1214 SMART iq_5 881 903 IPR000048 GO:0005515
Blo03g01423 1214 SMART iq_5 941 963 IPR000048 GO:0005515
Blo03g01423 1214 Gene3D - 576 770 - -
Blo03g01423 1214 Coils Coil 12 32 - -
Blo03g01423 1214 Gene3D Kinesin motor domain 205 809 IPR036961 -
Blo03g01423 1214 Pfam Myosin head (motor domain) 204 868 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo03g01423 1214 PRINTS Myosin heavy chain signature 232 251 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo03g01423 1214 PRINTS Myosin heavy chain signature 566 594 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo03g01423 1214 PRINTS Myosin heavy chain signature 286 311 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo03g01423 1214 PRINTS Myosin heavy chain signature 329 356 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo03g01423 1214 PRINTS Myosin heavy chain signature 622 650 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo03g01423 1214 Gene3D - 390 449 - -
Blo03g01423 1214 MobiDBLite consensus disorder prediction 1090 1110 - -
Blo03g01423 1214 PANTHER MYOSIN 35 1213 - -
Blo03g01423 1214 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 149 198 IPR004009 GO:0003774|GO:0005524|GO:0016459
Blo03g01423 1214 MobiDBLite consensus disorder prediction 21 56 - -
Blo03g01423 1214 Coils Coil 1002 1036 - -
Blo03g01423 1214 Pfam IQ calmodulin-binding motif 909 925 IPR000048 GO:0005515
Blo03g01423 1214 Pfam IQ calmodulin-binding motif 886 903 IPR000048 GO:0005515
Blo03g01423 1214 Pfam IQ calmodulin-binding motif 946 962 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01423 Blo-Chr3:40799765 Blo04g00005 Blo-Chr4:53343 0 dispersed
Blo03g01423 Blo-Chr3:40799765 Blo18g00260 Blo-Chr18:2747475 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01423 K10357 - zju:107430375 1594.33