Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01435 ATGGTCTCCCCAGAAAACACTAACTGGCTCTACGATTATGGAGTGATCGAAGATATCTCTGTCCGTGATGGGAATTTCTCCGTTTCAAATTCCGAATTTTCTTGGCCCGTACAGGCTTTGAATTGCTCATCTAATTTCAGCATGGAAATTGATGGATCATTGACAAATTCAGATTGCCCCAAGGAATCAAGCTCGAAAAAGAGGGTTAGATCTGAATCAAGTTGCGTATCCAGCTCCAAAGCATGTAGGGAGAAGTTGCGGAGAGATAAGCTGAATGACAAGTTTCTGGAGTTGGGCGCTATTCTGGATCCTGGACAACCACCTAAAACAGACAAGGCTGCAATTTTGATTGACGCTGTCCGAATGGTGACTCAATTACAAGGTGAAGCCCAGAAGTTGAAGGACTCAAATTCAAGTCTTCAGGAGAAGATTAAAGAGTTGAAGGCCGAGAAGAGTGAGCTTCGAGACGAGAAGCAGAGGCTAAAGGCAGAAAAAGAGAAATTGGAGCTTCAATTGAAGAACATGAATGCTCAGCCCAGCTACCTGCCTCCACCACCCACAATTCCGGCTGCATTTGCTGCTCAAGGCCAAGCTCCAGGCAATAAGTTGGTGCCTTTCATTACCTACCCTGGAGTTGCCATGTGGCAGTTCATGCCTCCTGCTGCGGTGGACACCTCACAAGATCATGTTCTCCGCCCACCAGTTGCTTAA 711 46.55 MVSPENTNWLYDYGVIEDISVRDGNFSVSNSEFSWPVQALNCSSNFSMEIDGSLTNSDCPKESSSKKRVRSESSCVSSSKACREKLRRDKLNDKFLELGAILDPGQPPKTDKAAILIDAVRMVTQLQGEAQKLKDSNSSLQEKIKELKAEKSELRDEKQRLKAEKEKLELQLKNMNAQPSYLPPPPTIPAAFAAQGQAPGNKLVPFITYPGVAMWQFMPPAAVDTSQDHVLRPPVA 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 40925272 40927433 + BLOR12616 Blo03g01435 58899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01435 236 CDD bHLH_AtILR3_like 80 155 - -
Blo03g01435 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Blo03g01435 236 Pfam Helix-loop-helix DNA-binding domain 79 127 IPR011598 GO:0046983
Blo03g01435 236 Coils Coil 123 178 - -
Blo03g01435 236 Gene3D arf6 gtpase in complex with a specific effector, jip4 125 179 - -
Blo03g01435 236 Gene3D - 61 124 IPR036638 GO:0046983
Blo03g01435 236 PANTHER TRANSCRIPTION FACTOR ILR3 1 236 - -
Blo03g01435 236 SMART finulus 81 132 IPR011598 GO:0046983
Blo03g01435 236 PANTHER BHLH TRANSCRIPTION FACTOR 1 236 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Blo03g01435 236 CDD bZIP 141 173 - -
Blo03g01435 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 151 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo03g01435 Blo10g00804 CCT
Blo03g01435 Blo07g00920 CCT
Blo03g01435 Blo10g00804 ECH
Blo03g01435 Blo07g00920 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01435 Blo-Chr3:40925272 Blo07g00920 Blo-Chr7:28223111 1.47E-108 dispersed
Blo02g00653 Blo-Chr2:16417722 Blo03g01435 Blo-Chr3:40925272 5.26E-07 transposed
Blo04g00884 Blo-Chr4:10141757 Blo03g01435 Blo-Chr3:40925272 5.31E-19 transposed
Blo07g00255 Blo-Chr7:3114397 Blo03g01435 Blo-Chr3:40925272 8.10E-36 transposed
Blo15g00649 Blo-Chr15:18034416 Blo03g01435 Blo-Chr3:40925272 1.07E-22 transposed
Blo10g00804 Blo-Chr10:25399348 Blo03g01435 Blo-Chr3:40925272 1.29E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12187 PF00010 HLH 3.10E-10 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01435 - - jre:109014401 333.569