Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo03g01435 | ATGGTCTCCCCAGAAAACACTAACTGGCTCTACGATTATGGAGTGATCGAAGATATCTCTGTCCGTGATGGGAATTTCTCCGTTTCAAATTCCGAATTTTCTTGGCCCGTACAGGCTTTGAATTGCTCATCTAATTTCAGCATGGAAATTGATGGATCATTGACAAATTCAGATTGCCCCAAGGAATCAAGCTCGAAAAAGAGGGTTAGATCTGAATCAAGTTGCGTATCCAGCTCCAAAGCATGTAGGGAGAAGTTGCGGAGAGATAAGCTGAATGACAAGTTTCTGGAGTTGGGCGCTATTCTGGATCCTGGACAACCACCTAAAACAGACAAGGCTGCAATTTTGATTGACGCTGTCCGAATGGTGACTCAATTACAAGGTGAAGCCCAGAAGTTGAAGGACTCAAATTCAAGTCTTCAGGAGAAGATTAAAGAGTTGAAGGCCGAGAAGAGTGAGCTTCGAGACGAGAAGCAGAGGCTAAAGGCAGAAAAAGAGAAATTGGAGCTTCAATTGAAGAACATGAATGCTCAGCCCAGCTACCTGCCTCCACCACCCACAATTCCGGCTGCATTTGCTGCTCAAGGCCAAGCTCCAGGCAATAAGTTGGTGCCTTTCATTACCTACCCTGGAGTTGCCATGTGGCAGTTCATGCCTCCTGCTGCGGTGGACACCTCACAAGATCATGTTCTCCGCCCACCAGTTGCTTAA | 711 | 46.55 | MVSPENTNWLYDYGVIEDISVRDGNFSVSNSEFSWPVQALNCSSNFSMEIDGSLTNSDCPKESSSKKRVRSESSCVSSSKACREKLRRDKLNDKFLELGAILDPGQPPKTDKAAILIDAVRMVTQLQGEAQKLKDSNSSLQEKIKELKAEKSELRDEKQRLKAEKEKLELQLKNMNAQPSYLPPPPTIPAAFAAQGQAPGNKLVPFITYPGVAMWQFMPPAAVDTSQDHVLRPPVA | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 40925272 | 40927433 | + | BLOR12616 | Blo03g01435 | 58899 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo03g01435 | 236 | CDD | bHLH_AtILR3_like | 80 | 155 | - | - | |
Blo03g01435 | 236 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 75 | 126 | IPR011598 | GO:0046983 | |
Blo03g01435 | 236 | Pfam | Helix-loop-helix DNA-binding domain | 79 | 127 | IPR011598 | GO:0046983 | |
Blo03g01435 | 236 | Coils | Coil | 123 | 178 | - | - | |
Blo03g01435 | 236 | Gene3D | arf6 gtpase in complex with a specific effector, jip4 | 125 | 179 | - | - | |
Blo03g01435 | 236 | Gene3D | - | 61 | 124 | IPR036638 | GO:0046983 | |
Blo03g01435 | 236 | PANTHER | TRANSCRIPTION FACTOR ILR3 | 1 | 236 | - | - | |
Blo03g01435 | 236 | SMART | finulus | 81 | 132 | IPR011598 | GO:0046983 | |
Blo03g01435 | 236 | PANTHER | BHLH TRANSCRIPTION FACTOR | 1 | 236 | IPR044818 | GO:0003700|GO:0006355|GO:0046983|GO:0055072 | |
Blo03g01435 | 236 | CDD | bZIP | 141 | 173 | - | - | |
Blo03g01435 | 236 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 80 | 151 | IPR036638 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo03g01435 | Blo10g00804 | CCT | |
Blo03g01435 | Blo07g00920 | CCT | |
Blo03g01435 | Blo10g00804 | ECH | |
Blo03g01435 | Blo07g00920 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g01435 | Blo-Chr3:40925272 | Blo07g00920 | Blo-Chr7:28223111 | 1.47E-108 | dispersed | |
Blo02g00653 | Blo-Chr2:16417722 | Blo03g01435 | Blo-Chr3:40925272 | 5.26E-07 | transposed | |
Blo04g00884 | Blo-Chr4:10141757 | Blo03g01435 | Blo-Chr3:40925272 | 5.31E-19 | transposed | |
Blo07g00255 | Blo-Chr7:3114397 | Blo03g01435 | Blo-Chr3:40925272 | 8.10E-36 | transposed | |
Blo15g00649 | Blo-Chr15:18034416 | Blo03g01435 | Blo-Chr3:40925272 | 1.07E-22 | transposed | |
Blo10g00804 | Blo-Chr10:25399348 | Blo03g01435 | Blo-Chr3:40925272 | 1.29E-115 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12187 | PF00010 | HLH | 3.10E-10 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo03g01435 | - | - | jre:109014401 | 333.569 |