Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01447 ATGAATGTATTCATCGGGGTCTTCATCTTCCTCATCCCTGTTTTCCTACTTCTTACCACAAGAAGTAAATCATCGAAAAAGCTCCCTCCTGGTTCTCTCGGAATTCCAATCATAGGCCAAAGCATTAGCTTTCTCCAAGCCTTGAGGAAGAACACTGCAGAACAATGGCTGCACCAAAGGATCAAAAAGTATGGACCCGTCTCCAAGCTCAGTCTCTTCGGCAAACCAACTGTTTTCATCAGCGGACAGGCTGCAAACAAGCTAGTATTCACCAGTGAGGATAGCACCATCAGTAACCAACAACCTAAGTCCGTTACGATGATTTTCGGCGACCGAAATATATTTGAGCTCAGCGGACACAACCATAAACGCGTAAGAGGGGCAATCCTATCGTTCTTAAGATCGGATTCCTTAAAAAAATATGTCCAAATAATGGACGAAGGAGTCAAAGAGCACCTCAAGATTCACTGGCAAGGCCAGCAAGAAGTCTCTGTCTTGCCCTTGATGAAGATTCTCACATTCAACATGATTTGTTCGCTTCTGTTCGGAATTGAGAAAGGAATCGCGAGAGAAAAATATATGGACTGTTTTCGGATGATGATTAAAGGGGTATGGTCGGTTCCGATCAACTTGCCGTTCAGTTCATTCAACAAAAGCCTGCGAGAAAGCAAAAGGGTTCAAGCCATGTTAAAGGATCTGATCAAAGAGAAGAAAATAAAACTTGAAAAAGAAGTTGATTATCCTCATCAAGATCTCATCTCTCACTTACTTAGGCTTCAAAAAGAAGGCATCAATGAAGAATTAAGCGAGAAGGAAATCATCCATAATACGATAGTCGTTATGTTTGCTGGACACGATACAACATCTGTTCTGCTTACTTTCATAATGAGGCAGCTGGCTAAAGATGATGTTGTTTATGCAGCTGTTCTTCAAGAACACAAAGAGATTGAAAAAAGCAAGCTCCCTGGAGAGTGCCTGACCTGGGAAGATCTTAACAAGATGAAGTACACATGGAGTGTAGCTCTTGAAACGTTGAGAGTCGTCCCTCCGGTTTTCGGTGTATTTAGACAAGTCTTGAAAGATATCGAATTTGATGGATATCTCATTCCAAAAGGATGGCAAATCTTCTCGGCGATGTCGATGACGCACATGGACGAGAGTGTATTTTTGGAATCATCGAAGTTTGACCCAAATAGATTCGAGAACCAATCTTCGATCCCTCGATTTTGCTTTGCGCCGTTCGGGGGTGGTCGGAGAGTCTGTCCTGGCAATGAGTTTGCAAGGATAGAAACTCTTGTTGCCATCCATTACATCATTACACACTTCACTTGGAAGCTATCTGCTGATGCTGATGATCTTTTCATAAGAGACCCCGTTCCAATCCCAACTAAAGGATTACTTATTCAAATTACACAAAGAAAACCATTATAA 1431 42.07 MNVFIGVFIFLIPVFLLLTTRSKSSKKLPPGSLGIPIIGQSISFLQALRKNTAEQWLHQRIKKYGPVSKLSLFGKPTVFISGQAANKLVFTSEDSTISNQQPKSVTMIFGDRNIFELSGHNHKRVRGAILSFLRSDSLKKYVQIMDEGVKEHLKIHWQGQQEVSVLPLMKILTFNMICSLLFGIEKGIAREKYMDCFRMMIKGVWSVPINLPFSSFNKSLRESKRVQAMLKDLIKEKKIKLEKEVDYPHQDLISHLLRLQKEGINEELSEKEIIHNTIVVMFAGHDTTSVLLTFIMRQLAKDDVVYAAVLQEHKEIEKSKLPGECLTWEDLNKMKYTWSVALETLRVVPPVFGVFRQVLKDIEFDGYLIPKGWQIFSAMSMTHMDESVFLESSKFDPNRFENQSSIPRFCFAPFGGGRRVCPGNEFARIETLVAIHYIITHFTWKLSADADDLFIRDPVPIPTKGLLIQITQRKPL 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41065637 41067337 - BLOR12628 Blo03g01447 58911

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01447 476 PANTHER CYTOCHROME P450 26 6 472 - -
Blo03g01447 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Blo03g01447 476 SUPERFAMILY Cytochrome P450 23 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 Pfam Cytochrome P450 29 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 Gene3D Cytochrome P450 18 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo03g01447 476 PANTHER OS07G0520300 PROTEIN 6 472 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01447 - - - tcc:18593563 608.216
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01447 Blo-Chr3:41065637 Blo18g00728 Blo-Chr18:19129791 7.55E-69 dispersed
Blo04g01232 Blo-Chr4:23897202 Blo03g01447 Blo-Chr3:41065637 2.24E-45 transposed
Blo03g00567 Blo-Chr3:22270962 Blo03g01447 Blo-Chr3:41065637 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g491 . Blo03g01447 Bda07g00354 Bda09g00395 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01210 . . . . . . . . . Bma07g01303 . . . . . . . . Cpe14g00747 . . . . . . . . Cla05g01497 Cam05g1614 . Cco05g1643 Clacu05g1597 Cmu05g1496 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g01447 Blo_Chr03 FPKM 11.330159 12.613457 22.876944 21.667257 7.538715 7.252256 6.506487 23.275906 27.066763 24.75519