Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01454 ATGCCTTCAGCTCAAGATCCATTCTACGTTGTGAAGGATGAAATCCAAGAATCTATTGATAAGGTGCAACAAACTTTTCACCGATGGGAGCGCATTTCTGATTTAGGAGAGCGATTACAGCTTACAAATGAGCTGCTTGGTAGCTGTGAAAGTATTGAGTGGCAGGTAGATGAATTAGACAAGGCTATATCTGTTGCTGCCAGAGATCCGGCTTGGTATGGAATTGATGAAGTGGAGCTCCAAAAACGGAAGAGATGGACTAGCACAGCTCGCGCACAGGTTGGCTCTGTGAAGAAGGTAGTGAAAACTGGGAAGGAGCTGAATGGTATAGGCAATACAACCACGAACATGAATGGAATGCATCGAGAACTGTTGTGGCTGCCTAATACTAATGAAAGAGACAGGGCCAACCAGTACGATGTTCAAGATAATGATGATTTCATAGCTTCAGAATCAGATCGGCAATTGCTTCTCATAAAGCAACAAAATGAAGAATTGGATGAGGTCAGTGCTAGCTTGGAGAGAATTGGAGGAGTTGGGCTAACAATTCATGATGAACTCCTTGCCCAGGAGAAAATTATCGATGACTTAGGAATGGAACTGGATAGTACTTCAAATCGTCTTGATTTTGTTCAGGAAGAACTGTACTATGAGAATGTTTCTTCTATTGTTATGTATGAACACTCTCTTAATGCCCCTGAATGCTTCAATGAGATAAGAGCATTGAATTGA 732 41.8 MPSAQDPFYVVKDEIQESIDKVQQTFHRWERISDLGERLQLTNELLGSCESIEWQVDELDKAISVAARDPAWYGIDEVELQKRKRWTSTARAQVGSVKKVVKTGKELNGIGNTTTNMNGMHRELLWLPNTNERDRANQYDVQDNDDFIASESDRQLLLIKQQNEELDEVSASLERIGGVGLTIHDELLAQEKIIDDLGMELDSTSNRLDFVQEELYYENVSSIVMYEHSLNAPECFNEIRALN 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41161869 41164729 - BLOR12635 Blo03g01454 58918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01454 243 CDD SNARE_Qc 159 215 - -
Blo03g01454 243 Coils Coil 194 214 - -
Blo03g01454 243 Gene3D - 158 217 - -
Blo03g01454 243 PANTHER SYNTAXIN PROTEIN 1 218 - -
Blo03g01454 243 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 156 218 IPR000727 -
Blo03g01454 243 PANTHER SYNTAXIN 1 218 IPR045242 -
Blo03g01454 243 SUPERFAMILY SNARE fusion complex 155 215 - -
Blo03g01454 243 Pfam Syntaxin 6, N-terminal 6 98 IPR015260 GO:0016020|GO:0048193
Blo03g01454 243 ProSitePatterns Syntaxin / epimorphin family signature. 162 201 IPR006012 GO:0005484|GO:0006886|GO:0016020
Blo03g01454 243 SUPERFAMILY t-snare proteins 5 99 IPR010989 GO:0016020|GO:0016192
Blo03g01454 243 Gene3D - 2 104 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00554 Blo-Chr3:21846350 Blo03g01454 Blo-Chr3:41161869 1.46E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01454 K08500 - zju:107433077 328.176