Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01459 ATGTTGCTTCAGATAGAGCAAGAGTGCTTGGACGTGTACAAGAAGAAAGTCGAGCAGGCTGCAAAGTCGAGAGCTCAGCTTCTTCAGGCCCTGTTGGATTCACAGCACGAACTATCCCATCTTTTATCTGCTCTTGGACAAAAGAGTGCAGTTGGAATTCCCGAGAAGAGCTTTGGAACTATTAAAGAAGAACTTGCAGCCATAGCCCCTGCTCTTGAACTGCTATGGAAACAGAAAGAGGAGAGAGTGAAGGAGTTTTCTGATGTACAATCACAAAGTCAGAAGATATATGGAGAGATTGCCGGGGACTCGAAGCTTAGCCAGACTCTAGCCGTCGATGAGGCCGATCTATCCCTGAAAAAGCTGGATGAATATCATGCAAAACTTCAAGAACTTCAGAGAGAAAAGAGCGATCGTTTGCACAAGGTTCTTGAATTCGTCAGCACCATCCACGATCTCTGCGCTGTTCTAGGATTGGATTTTTTTAGTACTGTAACAGATGTTCATCCGAGCTTAAATGACTCGACTGGTTTTCAATGCAAAAGCATTAGCAATGATACTTTATCGAGGTTGGCAAAGACAGTCCTATCTTTAAAGGAAGACAAAGAGCAGAGATTGCATAAGCTCCAAGAATTTTCAACTCAGCTCATTGAGCTATGGAATTTGATGGATACTCCTGAGGAGGAAAGAAAGTTGTTCAATCATGTTACATGTAACATATCAGTTTCGGTCGATGATGTCACTGTCCCGGGGGCTCTTGCCCTCGATCTTATCGAGCAGGCTGAGGTAGAAGTTGAAAGGCTTGATCAACTTAAAGCCAGCAGAATGAAGGAAATTGCGTTGAAGAAGCAGGCCGAGCTCGAAGAGATATTTGCTCATAGTCACATAGAAATAGACACGGAGGCGGCCAGGGAGAAAATTATGGCACTTGTTGATTCGGGTGAAGTTGAGCCGGCTGAGTTACTCGGAGATATGGATTGTCAAATTGCAAATGCCAAAGAAGAAGTCTTGAGCAGGAAAGAAATATTGGACAAGGTTGAGAAATGGATGTCAGCCTGTGAAGAAGAGAGTTGGCTGGAGGACTACAACAGGGATGAAAATCGGTATAATGCGAGCAGAGGCGCACATTTAAACCTCAAGAGGGCTGAAAAGGCTAGGATTTTGGTCAACAAAATTCCATCACTAGTTGATGCATTGGTAGGAAAAACCCAAGCTTGGGAGGAAGAACGGGGTGTGTCATTTGCGTATGATGGCGTGCCTCTTCTTGCGATGCTAGACGAATATGCTATGCTCCGACACGAAAGAGAAGAAGAAAGACGAAAAATGAGGGACCAGAAAAAGTTCCCCGAGCAACAAAACACGGAGCAAGAAGCAAGTTTCATGTCAAGGCCAAGCCTGACCAGACCATCTGGGACGAAGAAAGTAGTGGGTCCTCGCGTAAATGGGAATTCCAATGGAACTCCGGCCAGACGGTTGTCGCTTAATGCTCATCAAAATGGATCGAGGTCGATGTCAAAAGATGGAAAGCGGCCCATTGCTCCGGTGAACTACGTTGCCATATCGAAAGAGGATGCTGTTTCTCACGTATCAGGTAATGACTCCGGTCCATTTTCACCGTGA 1620 45.31 MLLQIEQECLDVYKKKVEQAAKSRAQLLQALLDSQHELSHLLSALGQKSAVGIPEKSFGTIKEELAAIAPALELLWKQKEERVKEFSDVQSQSQKIYGEIAGDSKLSQTLAVDEADLSLKKLDEYHAKLQELQREKSDRLHKVLEFVSTIHDLCAVLGLDFFSTVTDVHPSLNDSTGFQCKSISNDTLSRLAKTVLSLKEDKEQRLHKLQEFSTQLIELWNLMDTPEEERKLFNHVTCNISVSVDDVTVPGALALDLIEQAEVEVERLDQLKASRMKEIALKKQAELEEIFAHSHIEIDTEAAREKIMALVDSGEVEPAELLGDMDCQIANAKEEVLSRKEILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPSLVDALVGKTQAWEEERGVSFAYDGVPLLAMLDEYAMLRHEREEERRKMRDQKKFPEQQNTEQEASFMSRPSLTRPSGTKKVVGPRVNGNSNGTPARRLSLNAHQNGSRSMSKDGKRPIAPVNYVAISKEDAVSHVSGNDSGPFSP 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41206103 41208849 + BLOR12640 Blo03g01459 58923

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01459 539 MobiDBLite consensus disorder prediction 436 516 - -
Blo03g01459 539 Coils Coil 258 278 - -
Blo03g01459 539 MobiDBLite consensus disorder prediction 477 502 - -
Blo03g01459 539 Coils Coil 115 142 - -
Blo03g01459 539 MobiDBLite consensus disorder prediction 436 451 - -
Blo03g01459 539 Gene3D - 329 462 - -
Blo03g01459 539 MobiDBLite consensus disorder prediction 452 469 - -
Blo03g01459 539 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 1 538 IPR007145 GO:0000226|GO:0008017
Blo03g01459 539 Coils Coil 10 30 - -
Blo03g01459 539 Pfam Microtubule associated protein (MAP65/ASE1 family) 2 464 - -
Blo03g01459 539 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 1 1 538 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01459 K16732 PRC1, ASE1, MAP65; Ase1/PRC1/MAP65 family protein - qsu:112012954 862.448
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo03g01459 Blo10g00849 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00790 Blo-Chr1:11533261 Blo03g01459 Blo-Chr3:41206103 4.28E-165 dispersed
Blo03g01459 Blo-Chr3:41206103 Blo07g00883 Blo-Chr7:27557607 0 dispersed
Blo04g00377 Blo-Chr4:3015180 Blo03g01459 Blo-Chr3:41206103 3.42E-168 transposed
Blo10g00849 Blo-Chr10:26985119 Blo03g01459 Blo-Chr3:41206103 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g576 . Blo03g01459 . . . . . Bma13g01091 Cmo16g00948 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo10g00849 . Bda12g00935 . . . . . . . . Cma16g00913 . Car16g00886 Cpe14g00738 . . . . . . . . . . . . . . . . . Chy06g01848 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003979 3 1 2 4 2 1 2 1 1 1 1 1 1 1 1 2 1 3 1 1 1 1 1 1 1 1 1 3 2 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g01459 Blo_Chr03 FPKM 9.119975 10.081608 6.830825 6.393928 20.060091 20.806061 18.983603 3.393202 4.155933 3.69958