Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01469 ATGCACGGTATGACTGCCTTCTTTTCTCATCGCCTATCCTCCATGCATTCTGGTATTGATTTCGTTTTGAACCCTGTTTTCCTTCGTGGGTTTTCCGGGCTGTTGCACCTCGTCTTGTTATTTGGGTTATTTTTTTTATGGGTGCGCAAAATATCGAAGCTGGATCGTGATGGAAGTCCAAAAGAAAGGCTTAGGAGCAGAGTGTGTTCGCTCGATAAGCTGACTTTTGCTTTGAGTCTCTGCTTTTCTGTTTTCAATCTTCTCTTTTGTTTTTTGAACTACTTTTACTGGTATAAAAATGGATGGTCTGAAGAAAATCTGGCGATACTTTTGGATATGGCTCTTAGAACTGTTGCTTGGTTTGCTGTTTCCGTTTATCTATATACCCAAGTCGGAAAAAAGCCTCCTTTGTTGTTGAGAGTTTGGTGGGGTTTCTTCTTCTCTCTTTCTTGTTATTACATTTTCATCGACTTCATTCGTCACAAAAAGCATAGTTTTGTACCAGTACATGACATAGTTTTCGATGTTGTGTCGGCCATAAGTGGTCTATTCTTCACTTGTATGGGGGTTTTAGGGAAGAGGGAGAGTGATCAAGCAAATCTGGAAGAACCACTTTTAAATGGTCACGTAGACGCCATTAATGAGTCTGGGAAGTTTAAAGGGGACCAAACTGTAACCCCTTACTCTAATGCTGGAATTTTAAGTATTCTTTCCTTCTCTTGGATGGGTCCTCTAATTGCCACGGGCAATAAGAAGACATTAGACCTTGAGGATGTTCCTCAACTTTCCAGCAAAGATAGTGTCTCAGGGACTTATCCCACGTTTCAAAATAAGCTTGAATCCGATTGTGGTAGAATCAATGGAATCACCACATTTAGTATGGTGAAGGCATTATTCTATTCCGCCTGGAGGGAGATACTTCTAACGGCACTTTTTGCCTGCCTCTACACTCTGGCGTCTTATGTTGGCCCTTATCTAATTGACACCTTCGTCCAATACCTCAATGGTTCTCGACAATTTGAAAACGAAGGCTATGTATTAGTAGCTGCATTTTTTGGTGCAAAGATCGTGGAGTGTCTCTCAATGAGACATTGGTTCTTTAGGCTGCAAGTGGTTGGAATTCGGATGAGAGCAGTTATTAACGCAATGATATACAATAAAGCCTTGACCCTCTCGGGCCAATCCAAGCAGAAACACACGAGTGGAGAGATCATTAATTTTATGACAGTCGATGCAGAGAGGGTCGGAGAATTCAGTTGGTACATGCACGATCCATGGATGGTCCTTCTGCAGGTTTCTTTAGCCTTGTTGATTTTGTATAAAAATCTCGGGCTTGCTTCGGTTGTAACTCTTTTTGCAACTATACTTGTTATGTTAGCAAATGTTCCTTTGGGGAAATTGCAAGAGAAGTACCAAGACAAGATAATGGAGTCAAAAGATAATAGAATGAAGGCAACTTCTGAAATCTTACGAAACATGAGGATACTCAAGCTTCAAGGATGGGAGATGAAGTTTCTCTCGAAAATTTTTGAGTTGAGGAAGGTCGAGGCGGGATGGTTGAAAAAATATGTTTACACGATGGCGATGACCACATTTGTCTTCTATGGAGCTCCCACATTTGTCTCTGTGGTGACTTTTGGTGCTTGTATGGTCATGGGGATCCCACTAGAATCTGGCAAAATTTTATCTGCTCTTGCAACTTTTAGAATTCTTCAAGAACCCATTTACAATCTTCCTGACACAATATCAATGATGGTTCAAACTAAAGTTTCTCTTGACAGAATTGTCTCCTTCCTTCGACTTAACGACTTGCAGACTGATATCGTTGAGCAGCTTCCAATGGGTAGTTCTGATATGGCAGTTGAGATTGCAGATGGGAATTTCTCATGGGATTTATCTTCTCCAAATCCAACTCTTCAAGATATTAACTTGAAAGTCTCCCAAGGTATGAGGGTTGCTATTTGTGGAACTGTAGGTTCTGGCAAGTCAAGCTTGCTTTCATGTATCTTAGGAGAGGTACCTAAGATTTCGGGAAGTCTTAAAGTTTGTGGAACCAAAGCATATGTAGCTCAGTCGCCTTGGATTCAAAGTGGAAAGATAGAAGAGAATATCTTGTTTGGAAAAGACATGGATAGAAGGAAGTATGATAGGGTTCTTGATGCTTGCTCACTGATGAAAGACCTTGAAATTCTCTCTTTTGGCGATCAGACCGTGATTGGGGAGAGAGGGATAAATTTGAGTGGCGGGCAGAAGCAAAGAATACAAATTGCACGCTCTCTCTATCAAGATGCTGATATCTACTTGTTTGATGATCCGTTTAGTGCGGTTGATGCTCATACTGGTTCTCACCTCTTTAAGGAATGCTTACTCGGCCTTTTAAGTTCGAAAACAGTGATTTATATAACTCATCAAGTAGAATTTTTACCTGCTGCTGATCTTATCTTGGTAATGAAGGATGGAAAGATCACTCAAGCTGGAAAGTACAATGAAATTCTCGCTACGGGAACTGATTTTATGGCACTCGTGGGTGCACATAAGGAAGCTCTGTCAGCACTTGATTCTGTAGAGAGAGAGCCTGCTTCGGAAAACTTACCCAATACCACTGAAGATGTCAATGGTGTTGTTAGAGAGGAAGAAAAGAGAGATATTCAAGATGGTAAAGCAGAAGGTGAAGCTAAATCGAAAGGCCAACTTGTTCAAGATGAAGAGAGAGAGAAAGGCAAAGTTGGGTTTGCAGTGTACTGGAAATATCTTACATCTTCATATGGAGGAGCTCTTGTGCCGTTTATACTACTCGCTCAGATTCTCTTTCAGACTCTTCAAATAGGAAGCAATTACTGGATGGCTTGGGCATCTCCGGTCTCCAAGGATGTGAAGCCAAATGTTGATGGTTCTACACTTATTATGGTTTATGTGGCCATGGCAATTGGAAGTTCTCTTTGTGTCCTTGTAAGAACAACTCTTCTCGTCACTGCTGGCTATAATTCGGCGACTCTACTCTTCAACAAAATGCATCAATGCATTTTCCGAGCCCCCATGTCGTTTTTTGACTCGACGCCTAGTGGACGAATCTTGAATAGGGCTTCTACTGATCAAAGTGCCGTAGATATGGACATTCCATTTCGAGTTGGAGCTTTTGCCTTCTCAATGATCCAACTTCTCGGAATTATCGCAGTAATGTCTCAGGTTGCTTGGCAGGTTTTCATTGTTTTTGTTCCTGTAATTGCGCTATGTATTTGGTATCAGCAATATTATATACCTTCGGCGAGAGAGCTGGCTCGTTTAGTTGGAGTATGTAAAGCTCCAGTTATACAGCATTTTGCTGAAACAATTTCTGGGGCATCTACCATCAGGAGCTTTGATCAAGAATCAAGATTTAAAGACTTGAATATGACGCTGACGGATGCGTATTCTCGGCCCAAGTTCAACAATGCAGGAGCGATGGAATGGCTCTGCTTTCGACTCGATGTGTTATCGTCCATCACTTTCGCCTTTTCATTGATTTTCCTAATCTCCATCCCTCGAGGAATTATCGATCCAGGCATTGCTGGCTTGGCTGTGACGTATGGACTTAACCTGAATATGCTACAAGCTTGGCTAATATGGAACCTGTGTAATATGGAAAACAAAATGATATCAGTGGAAAGAATACTGCAATATGCTTCTGTCCCTAGTGAGCCACCGTTGGTTGTCGAAGAAAACCGACCAGATAACGCCTGGCCATCGTGTGGAGAAGTTGAAATTCATGATCTACAGGTTCGATATGCCCCACACATGCCCCTTGTGTTGCGAGGAATCTCGTGTACTTTCCCGGGAGGTAAAAAGACTGGAATAGTCGGAAGAACAGGCAGCGGAAAATCTACTCTGATTCAGACACTTTTCCGGATAGTTGAACCGACTGCGGGAGAAATAAAAATTGATAAAATCAACATCGCTTCAATTGGACTGCACGATTTGAGATTGAGGCTGAGCATTATTCCTCAAGATCCAACCATGTTTGAAGGGACTGTTCGAACCAACTTGGACCCACTCGAGGAGTATACCGATGAACAAATTTGGGAGGCTCTGGATAAATGCCAACTTGGAGATGAAGTCAGGAAAAAAGAAGGAAAGCTAGATTCGTCAGTTAGTGAGAATGGTGAGAACTGGAGTATGGGTCAGAGGCAACTCGTCTGCCTTGGCCGGGTTCTGCTGAAGAAAAGTCGGGTTTTGGTTCTCGATGAGGCTACTGCCTCGGTCGATACAGCTACTGATAATCTCATACAACAAACACTCAGACAGCATTTTTCGAACTGCACCGTCATCGTAATTGCCCATCGAATTACTTCTGTTCTTGACAGTGACATGGTTCTTCTCCTCAGTCACGGGCTGGTCGAGGAGTATGATTCACCGACTAGATTGCTGGAGAACAAATCTTCAGCTTTTGCTCAGCTTGTGTCGGAGTATACTGTTAGGTCTAATACGAGTTTAGAGAAGTTGAGTTGTAGCTGA 4491 42.26 MHGMTAFFSHRLSSMHSGIDFVLNPVFLRGFSGLLHLVLLFGLFFLWVRKISKLDRDGSPKERLRSRVCSLDKLTFALSLCFSVFNLLFCFLNYFYWYKNGWSEENLAILLDMALRTVAWFAVSVYLYTQVGKKPPLLLRVWWGFFFSLSCYYIFIDFIRHKKHSFVPVHDIVFDVVSAISGLFFTCMGVLGKRESDQANLEEPLLNGHVDAINESGKFKGDQTVTPYSNAGILSILSFSWMGPLIATGNKKTLDLEDVPQLSSKDSVSGTYPTFQNKLESDCGRINGITTFSMVKALFYSAWREILLTALFACLYTLASYVGPYLIDTFVQYLNGSRQFENEGYVLVAAFFGAKIVECLSMRHWFFRLQVVGIRMRAVINAMIYNKALTLSGQSKQKHTSGEIINFMTVDAERVGEFSWYMHDPWMVLLQVSLALLILYKNLGLASVVTLFATILVMLANVPLGKLQEKYQDKIMESKDNRMKATSEILRNMRILKLQGWEMKFLSKIFELRKVEAGWLKKYVYTMAMTTFVFYGAPTFVSVVTFGACMVMGIPLESGKILSALATFRILQEPIYNLPDTISMMVQTKVSLDRIVSFLRLNDLQTDIVEQLPMGSSDMAVEIADGNFSWDLSSPNPTLQDINLKVSQGMRVAICGTVGSGKSSLLSCILGEVPKISGSLKVCGTKAYVAQSPWIQSGKIEENILFGKDMDRRKYDRVLDACSLMKDLEILSFGDQTVIGERGINLSGGQKQRIQIARSLYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVIYITHQVEFLPAADLILVMKDGKITQAGKYNEILATGTDFMALVGAHKEALSALDSVEREPASENLPNTTEDVNGVVREEEKRDIQDGKAEGEAKSKGQLVQDEEREKGKVGFAVYWKYLTSSYGGALVPFILLAQILFQTLQIGSNYWMAWASPVSKDVKPNVDGSTLIMVYVAMAIGSSLCVLVRTTLLVTAGYNSATLLFNKMHQCIFRAPMSFFDSTPSGRILNRASTDQSAVDMDIPFRVGAFAFSMIQLLGIIAVMSQVAWQVFIVFVPVIALCIWYQQYYIPSARELARLVGVCKAPVIQHFAETISGASTIRSFDQESRFKDLNMTLTDAYSRPKFNNAGAMEWLCFRLDVLSSITFAFSLIFLISIPRGIIDPGIAGLAVTYGLNLNMLQAWLIWNLCNMENKMISVERILQYASVPSEPPLVVEENRPDNAWPSCGEVEIHDLQVRYAPHMPLVLRGISCTFPGGKKTGIVGRTGSGKSTLIQTLFRIVEPTAGEIKIDKINIASIGLHDLRLRLSIIPQDPTMFEGTVRTNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSSVSENGENWSMGQRQLVCLGRVLLKKSRVLVLDEATASVDTATDNLIQQTLRQHFSNCTVIVIAHRITSVLDSDMVLLLSHGLVEEYDSPTRLLENKSSAFAQLVSEYTVRSNTSLEKLSCS 1496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41326466 41331902 + BLOR12650 Blo03g01469 58933

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01469 1496 SMART AAA_5 1272 1464 IPR003593 -
Blo03g01469 1496 SMART AAA_5 648 821 IPR003593 -
Blo03g01469 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1238 1479 IPR027417 -
Blo03g01469 1496 Gene3D - 1229 1482 IPR027417 -
Blo03g01469 1496 MobiDBLite consensus disorder prediction 877 901 - -
Blo03g01469 1496 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 307 587 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo03g01469 1496 SUPERFAMILY ABC transporter transmembrane region 297 595 IPR036640 GO:0005524|GO:0016021
Blo03g01469 1496 Pfam ABC transporter 1263 1411 IPR003439 GO:0005524
Blo03g01469 1496 CDD ABC_6TM_ABCC_D1 308 595 IPR044746 GO:0140359
Blo03g01469 1496 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 929 1209 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo03g01469 1496 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 104 1493 - -
Blo03g01469 1496 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 104 1493 - -
Blo03g01469 1496 Gene3D - 603 863 IPR027417 -
Blo03g01469 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 843 IPR027417 -
Blo03g01469 1496 Gene3D ABC transporter type 1, transmembrane domain 889 1227 IPR036640 GO:0005524|GO:0016021
Blo03g01469 1496 Gene3D ABC transporter type 1, transmembrane domain 285 602 IPR036640 GO:0005524|GO:0016021
Blo03g01469 1496 CDD ABC_6TM_ABCC_D2 927 1221 IPR044726 GO:0140359
Blo03g01469 1496 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1246 1480 IPR003439 GO:0005524
Blo03g01469 1496 SUPERFAMILY ABC transporter transmembrane region 927 1227 IPR036640 GO:0005524|GO:0016021
Blo03g01469 1496 CDD ABCC_MRP_domain1 621 821 - -
Blo03g01469 1496 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 621 844 IPR003439 GO:0005524
Blo03g01469 1496 ProSitePatterns ABC transporters family signature. 746 760 IPR017871 GO:0005524
Blo03g01469 1496 CDD ABCC_MRP_domain2 1244 1464 - -
Blo03g01469 1496 Pfam ABC transporter transmembrane region 930 1172 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo03g01469 1496 Pfam ABC transporter transmembrane region 308 574 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Blo03g01469 1496 Pfam ABC transporter 639 773 IPR003439 GO:0005524
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01469 - - K05666 jre:108985153 2227.21
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00260 Blo-Chr2:2498092 Blo03g01469 Blo-Chr3:41326466 0 dispersed
Blo03g01469 Blo-Chr3:41326466 Blo05g00463 Blo-Chr5:6904302 0 dispersed
Blo03g01469 Blo-Chr3:41326466 Blo11g00984 Blo-Chr11:24140665 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g625 . Blo03g01469 . Bda09g00417 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi02g01855 . . Cme06g02771 . . . . . . Bma07g01268 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002483 1 1 1 1 1 1 2 2 2 1 1 2 2 1 2 2 2 2 2 1 1 3 2 2 3 2 1 3 6 6 59
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g01469 Blo_Chr03 FPKM 42.614151 46.7225 30.970713 25.805916 31.435225 33.24107 30.56979 33.069447 32.309669 30.184177