Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01478 TCAAATTTCTGCAGAGAGAAAGTTTTTGTTCCCAGAAACAAACCGTATATTTCCTTCATCGGCGACGAGAATCGAACTTCAGACACTGTAATTTCATGGAACGACAAAGCATCTGATAGAGATGAAAATGGGAACAGTCTCGGAACATACAGGTCCGCATCTGTGGCGATCGAATCGGATTACTTTTGCGCTACTGGGATCACATTTGAGGCAAGAACTCTGACTCTTCTGTTTGTAACTGCAGTGCCGGGAGGAGAGGGAATGCAAGCAGTTGCAGTGAGAATTGCAGGGGATAAAGCCATGTTCTACAGAGTTAGAGTATTGGGAGATCAAGACACTCTCTTAGACGAATCTGGAACGCACTATTTCTACAAATGTCACATCCAAGGAAGCAACCAAATCTCCCATCTAGAAATATGCTTCTTCTTGATTTTAACAATCCTCTCGTGGAACATTCAGCACTGCAGGCTTGTATCAACGGCCAAGAACTACGGCGCCATTGCAGCTCATCACAGAGATTCTCCCGACGAAGACACAGGCTTCTCCTTCGTTCACTGCAAAATCAATGGAACCGGCAATGTTCTTCTGGGAAGAGCCTGGGGAAACTATTCGAGAGCAATCTACTCCTACTGTTACATGACAGACATCATAAACCCTCAAGGCTGGAGCGACTGGAACTACCCATCAAGAGAAAGGACGGCAGTATTTGGCGAGTTCAGATGCAGAGGCAAGGGAGCTGATGCGAGAAGCAGAGTGCCATGGTCGAAGACTTTCACCTTCGAGGAAGCCAAGCCTTTTTTAAACTTGAATTTCATCAATGGAGATCAGTGGCTTAGACTGTAG 843 45.79 SNFCREKVFVPRNKPYISFIGDENRTSDTVISWNDKASDRDENGNSLGTYRSASVAIESDYFCATGITFEARTLTLLFVTAVPGGEGMQAVAVRIAGDKAMFYRVRVLGDQDTLLDESGTHYFYKCHIQGSNQISHLEICFFLILTILSWNIQHCRLVSTAKNYGAIAAHHRDSPDEDTGFSFVHCKINGTGNVLLGRAWGNYSRAIYSYCYMTDIINPQGWSDWNYPSRERTAVFGEFRCRGKGADARSRVPWSKTFTFEEAKPFLNLNFINGDQWLRL 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41564299 41565395 + BLOR12659 Blo03g01478 58942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01478 280 Gene3D - 3 280 IPR012334 -
Blo03g01478 280 PANTHER PECTINESTERASE QRT1 5 280 - -
Blo03g01478 280 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 280 - -
Blo03g01478 280 SUPERFAMILY Pectin lyase-like 5 278 IPR011050 -
Blo03g01478 280 Pfam Pectinesterase 5 275 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00518 Blo-Chr3:19417878 Blo03g01478 Blo-Chr3:41564299 2.41E-148 dispersed
Blo03g01478 Blo-Chr3:41564299 Blo14g00522 Blo-Chr14:7391923 2.90E-71 dispersed
Blo03g01478 Blo-Chr3:41564299 Blo05g00245 Blo-Chr5:2743288 2.38E-68 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01478 K01051 - jre:108983471 392.889