Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01495 ATGTTATCCATAGAGAGCCCTTCTACAGATCCCGCATGTCCTCAGCAAAAACCTTGTAATGAGAGGACTTCTCATAAGCGTGGCTTGCCTGAGGCAGATCTGTCGAAGCCCGCCATTGTTAATGAAACTTCTTTTCCTAAGTTCTCCATAAGCAGAGAATATGTTCTTAGTTCTCGAAGTAAGGATATCAAAGCAAACTGGCCATTTTCTCCAAAAACATTGCAGCTCTGTTTGAAACATGGCGTGAAGGATCTTCTGCCACCTTTTCAGTCTCTTCTTTCAGTTACAGCTCCGTCCTTTGGTGTATGTACTGCTGAAAATGCTAAGCCTGAGAGCAGAAGTATAAGCAGCGTCCAAGGAGAGCCTGCTCAGTGGGATCATCATGGGGTGTTAACCCCTTCAAAATTTGCAAAATCGGATGAGAAGCAAAGACAAACTTGCATAGAATCCAACTCGCTTAGATTTGGAGGAAATGATTTACAGTCCACAACAACCAGTCTTTCTCCATCTGAAATCGATTCGATTCCAACCATCCGCTCTTCAAATTCACCAGTAGAGTTCAATACACTATCAGAAGCCCCGGCCGAAGACGAGCCTGCACAGCCTCCAGTATCCCGAAAAACTGAAAGGATGGCCAAACCGTTGGGTAAGAAGTGCCGATTTTCGGTTAAGTACGGAGCCCAGGCCTCTCCAGCATCAGGTGAAGATATTGTTTCCAATTGTACTACAACATCAGAGACAATGGCTTCAAAAACTTGTCCTGTTTGCAAAACTTTCTCATCACCTTCAAATACTACCTTAAATGCGCATATCGACCAATGCCTTTCTGCGGAATCAACCCCTAAATGGTCATTGGATTCTAAATCTATTAAGCATAAATTTAAACCAAGGAAGACAAAGTTGTTGGTGGATATTTATACTACTGCCTTACCATGCACATTGGAAGATCTCGACCGAAGAAATGGTACGACCTGGGCCATAGCATCGAGACCAACTCCAGATATTGAGAAATCTGATATGCATTGTGAAGGGAAAAGGGATAGTGGGTTTTTAGCTCACCCTAACATTACTAATGAAGGTGGAGTTTACTTTGATGCTGAAGGTACCAAACTTAGAATTTTATCTGCGTTTAATGACGAATCGAGGTCAAAAGTGAAAGATAGTCTTGGATCAACAAGACCCAAGAAGGAAGATGAAGGTAAAAAATTCAAGTTATCAAAAAGAAAAAAGTACCATGCATCTAAGCATCGAAAATTTCGTAAACTTGCCGTTCGAAGGAAAAAAATTTCTCCTCAGAAGGACCCTACAAGTCAGATTGATAAAGGTCGCAACGGAAATAATGGATTGGAAGAAGGCTGCAAGATGGACAAACATCAGATGAAGTCCAGGAAACCTCGTGATTCTGGTTGTTTAAGACAATGGATTTGCTCCAAACGAACTGGGGTTGCAAAAAAGGTCATAAGTAAAGAAGTTCATCCAAAATTTAAATGTAAATGGCTCGTATCAGAAGACTTATTGGTTCGGTCCGACCAATCACGTTTAGATGATATGAAGAACGAGAAAAACTCTGTTCCGAGACATTCAAACTTGTCAGGAAATCAAATTTTTTCTCCTGAAGACATTAACACGATAGAAAGGGAATGCCCATTATATGGCGATCGAATTTTGAACCATAGGGGACTTATTAAAGATGTCAGTGCTCTTCCACCAGTGAAAGAAAATGTCTATGAGCTCAAAAAAGGAAAGCCTTCCGTGGGCGGTGGGTTCTTGATGAAACCGCCAAATCTCAATGGGGATAGTTGTGATGGCTTGTCAAAGGATGGTAAAGCAACTGTTTTTGAAAACGCAAAATTCTACGAGTCGAGTGAAAATATGTCTTCTTTTAGTGAGCCATTATCCGAAAGTGGATCTAAATCTCCTCTAGTGAAGAATCGATCAGCTATTACCAATAGTCAAACTGAATTCAGGGCGAAAATAGATGAAAAGATAATGAGTTTGCATTCTGAAACTGATCCAAGGTGTAGGTTGCTTGACAGGAGTTCTGAAAGTTGGTCAGAAAGAAAGGAGATTGCTGCAGTGCTTCCTAAAAGTACATTAAAAGTGAACGAAAACAGAAGAAGACTACTGAGCATCTCTCAAAGGAAGAATGAAACCATGGGTTTGACGAGTTTGTCATCAGGTTCTCCAACCAGTAAACACTGTGATGGTGATAACTTACACTCTTCTGCTCATGGAGGATTAAAGTGTTTTGACGGAAAGACGGGAATTGAATCTGCTGGAGAAGTGGTTCAAATTCCTAAGGAAAGGACTGGCATTAAGCCATCTTCAAAAGCGATAAGTTTGGCTAATTCTGTGAATCCAAATGTTCATGAGCTGGTCAATAGCACCATGGCTAGATCAGGCCTCTTGCAGTTCAGCAGTAGTCGTAAACAGCCAGCATACGGAGCAGAAGAACAGGATCTCAAAAGCAAGCTTGAATTTTATGATCAGCAAGAATCGACAGCTGTGATTAGGTACAATGCTCATGAAACTGGGGAGTTCCATTCTGAAACAAGTCCGGCTAATTCTTTTGATCCTATACTTATTCCTGGACCTCCCGGATCGTTTTTGCCTAGTCCTAGGGCAATGCGATCAGATGAATTTCAAGGAAATTCTTCTCTAACCAGTAGCCAAGTTTACTCTGATGAACAAGATTTCACTGATGGAGATTCATCGGATTCGCCGATTTCTTCGTCATCGACCTTCTCAACTTTCACAGCATCTAGATTTGATTTGGATTACTTTGCACCTACCCAACCAAATACCTTTGAAACCAAGACAAGGTCTGTACTCTCGGGTCATGATTTGAAGCCTTCAACGGAGAATACTACTACTGGAACCAAAAACATTTCTTGTGACAGAGAGAGTCTTCAAGTCAGGCAGAACCCTCTTAAGGAAAATCTCTGCTGTTGCCAAAGAGAGGAAAAAAATCCTCGTGGAGTTAATTTAAACTATCAACAACCGCAGCTGTTGAAGCATCTGTCATTTCCTGCAGTTGCCAATCCTTGCTGTAATAAGCAAATGGGTTACAATCTAAATAGAAGAATCAACGAATTGGAAATCCCTTCTTTGTGCTGTTGCAGTAGGTCGGAAAAGGCCACTCCTCCCATGGGGCAGTCCCCGGAAGATTTCTTTCGTTCTCCCAAGGAACTGGGAGTGAAGCTTCCAGATTGTGGCAATTTTGAGAGTGCTACTTCATCATCTTCTAACCCTGTACTAAGGTTGATGGGGAAGAATTTGATGGTGATCAACAAGAATGAAGACGCGTCTTCGAGAGTGGAGCAAACTAAACCATCTTCCCTGTTCAGCCACGTCTTGGAGTTTCCGACATATCTGAATACGTCTTCTGGCAATCCTGCAAATAAAGACAGCCATTTCTTTCGTCATAGAGTTCCCGAAGATTTGATGACCGGTGATAAAAATTCATGCAATTACATGGGTCGACATTTTGATGTCAGACTGTTGGATGGGTTTAGAACCCATATGGGTTTGAAGACATCACAAACATTTTTACCAAGGCCAGAAGTATTGCATCCGGGCTATCAAACAGATAATGGTGGTTTCATCACATCAAAAGAGCCTCCTCGCTCCCACCAAATGAATTCACATTCCAGGGTTGAAGAAATTGACAGCATTGTCGATGGTCGTCCAAATTGTGCTCTAAATATGACTGCCTATGGTCCAAAGTACTCTAGAGACTTCGGAGCCAGTCGCAAACACACACCCGGAATTCAATTTCGGATATTTCCCAGTTGTAACACAGCATATTATCAGCAGGAGCATCCTTAA 3828 41.8 MLSIESPSTDPACPQQKPCNERTSHKRGLPEADLSKPAIVNETSFPKFSISREYVLSSRSKDIKANWPFSPKTLQLCLKHGVKDLLPPFQSLLSVTAPSFGVCTAENAKPESRSISSVQGEPAQWDHHGVLTPSKFAKSDEKQRQTCIESNSLRFGGNDLQSTTTSLSPSEIDSIPTIRSSNSPVEFNTLSEAPAEDEPAQPPVSRKTERMAKPLGKKCRFSVKYGAQASPASGEDIVSNCTTTSETMASKTCPVCKTFSSPSNTTLNAHIDQCLSAESTPKWSLDSKSIKHKFKPRKTKLLVDIYTTALPCTLEDLDRRNGTTWAIASRPTPDIEKSDMHCEGKRDSGFLAHPNITNEGGVYFDAEGTKLRILSAFNDESRSKVKDSLGSTRPKKEDEGKKFKLSKRKKYHASKHRKFRKLAVRRKKISPQKDPTSQIDKGRNGNNGLEEGCKMDKHQMKSRKPRDSGCLRQWICSKRTGVAKKVISKEVHPKFKCKWLVSEDLLVRSDQSRLDDMKNEKNSVPRHSNLSGNQIFSPEDINTIERECPLYGDRILNHRGLIKDVSALPPVKENVYELKKGKPSVGGGFLMKPPNLNGDSCDGLSKDGKATVFENAKFYESSENMSSFSEPLSESGSKSPLVKNRSAITNSQTEFRAKIDEKIMSLHSETDPRCRLLDRSSESWSERKEIAAVLPKSTLKVNENRRRLLSISQRKNETMGLTSLSSGSPTSKHCDGDNLHSSAHGGLKCFDGKTGIESAGEVVQIPKERTGIKPSSKAISLANSVNPNVHELVNSTMARSGLLQFSSSRKQPAYGAEEQDLKSKLEFYDQQESTAVIRYNAHETGEFHSETSPANSFDPILIPGPPGSFLPSPRAMRSDEFQGNSSLTSSQVYSDEQDFTDGDSSDSPISSSSTFSTFTASRFDLDYFAPTQPNTFETKTRSVLSGHDLKPSTENTTTGTKNISCDRESLQVRQNPLKENLCCCQREEKNPRGVNLNYQQPQLLKHLSFPAVANPCCNKQMGYNLNRRINELEIPSLCCCSRSEKATPPMGQSPEDFFRSPKELGVKLPDCGNFESATSSSSNPVLRLMGKNLMVINKNEDASSRVEQTKPSSLFSHVLEFPTYLNTSSGNPANKDSHFFRHRVPEDLMTGDKNSCNYMGRHFDVRLLDGFRTHMGLKTSQTFLPRPEVLHPGYQTDNGGFITSKEPPRSHQMNSHSRVEEIDSIVDGRPNCALNMTAYGPKYSRDFGASRKHTPGIQFRIFPSCNTAYYQQEHP 1275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 41786515 41791072 - BLOR12676 Blo03g01495 58959

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01495 1275 MobiDBLite consensus disorder prediction 1 35 - -
Blo03g01495 1275 MobiDBLite consensus disorder prediction 159 189 - -
Blo03g01495 1275 Gene3D Classic Zinc Finger 250 278 - -
Blo03g01495 1275 PANTHER HAPLESS PROTEIN 1 1265 - -
Blo03g01495 1275 MobiDBLite consensus disorder prediction 382 465 - -
Blo03g01495 1275 MobiDBLite consensus disorder prediction 159 212 - -
Blo03g01495 1275 PANTHER HAPLESS PROTEIN 1 1265 - -
Blo03g01495 1275 MobiDBLite consensus disorder prediction 1 19 - -
Blo03g01495 1275 MobiDBLite consensus disorder prediction 450 465 - -
Blo03g01495 1275 MobiDBLite consensus disorder prediction 382 404 - -
Blo03g01495 1275 MobiDBLite consensus disorder prediction 878 914 - -
Blo03g01495 1275 MobiDBLite consensus disorder prediction 846 914 - -
Blo03g01495 1275 MobiDBLite consensus disorder prediction 405 427 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01495 - - - qsu:111998420 726.472
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01495 Blo-Chr3:41786515 Blo13g00308 Blo-Chr13:16580776 6.73E-06 dispersed
Blo03g01495 Blo-Chr3:41786515 Blo04g01236 Blo-Chr4:24047219 2.61E-06 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g790 . Blo03g01495 . . . Bpe08g01073 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag1275 Cone15ag1301 . . . . . . . . . . . . . . . . Cma16g00997 . Car16g00954 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006752 0 2 1 1 1 1 2 1 1 1 2 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 4 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo03g01495 Blo_Chr03 FPKM 2.481186 3.334834 4.707533 6.623235 10.404298 10.772415 11.534571 14.018532 14.722716 15.093953