Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01530 ATGGCCACTTCAGTTCCAAATACATCAGTTTCAAAAAGGTCCCTAAGAAAGAAATCGGGACCACGAAATTACGATGAGAATTTGTTTGATGAGTTTATAGATGAGCATTTAGGAAGTGATTTGAGGAAGAGGAATCGAACAAGGGAGGATTTGGAGAAAGAGACTGAAACCGAGGCAATGATAGCGTTATCTCTTGGATTCCCGATCGATGCACTTCTCGAAGAGGAAATTCAAGCAGGGGTTGTGAGAGAATTGGGTGGAAAAGAACAGAACGATTATATAGTCGTCAGAAATCATATTCTAGCGAGATGGAGAGATAATGTCCGAATTTGGGTCTCAAAAAGGCAGATTAAAGAAACTGTTAGTATTGAGTACGAACATTTGATAAGTGCAGCTTATGATTTTCTTTCTTATAATGGATATATTAATTTTGGGGTAGCTCCATCTTTTATTTCTCAAATTCCAGAGGAGTCATCTGAGGGTTCTGTTATTATTGTTGGAGCTGGGTTAGCTGGCTTAGCAGCTGCAAGGCAACTTTTATCATTTGGCTTCAAAGTTATAGTATTAGAAGCTAGAAACCGACCAGGTGGAAGAGTTTACACTCAGAAAATGGGAAGTGATGGAAGATTTGCTGCGGTAGATCTTGGTGGCAGTGTAATTACTGGAATTCATGCGAATCCTTTAGGAGTTCTTGCTAGACAGCTTTCAATTCCGCTTCATAAGGTCAGAGATAATTGTCCTTTATATCGTCCAGATGGGGCGCCTGTCCAGAAGGAAATCGATTCAAAGATTGAGTTCATCTTCAATAAGATGCTCGACAAAGTCACTGAGCTGAGACAAATAATGGGTGGATTTGCAAATAATATCTCTCTAGGAACTGTTTTGGAAACTCTTCGGCAGTTGTATGCTGTGGCAAGAACGACTGACGAGAGACAACTCCTCGATTGGCATTTGGCAAATCTCGAATATGCAAATGCCGGGTGTCTTTTTGACTTATCAGCGGCATATTGGGACCAAGATGATCCATATGAAATGGGGGGAGATCATTGCTTCCTCACAGGCGGGAACTGGCGATTGATAAAAGCATTGTCCGAAAAAGTTCCGATTTTCTACGGAAAGATTGTTAACACCATTCGATACGGAAGCGAAGGAGTCGAAGTGATAGCCGGAAATCAAGTTTTTCAAGCAGATACCATCCTATGCACTGTACCTCTTGGCGTTTTGAAGCAAAAAGTGATTAAATTCGAACCGGAGCTACCACAAAAGAAGATTGCAGCCATTGAGAGATTGGGGTTTGGGCTGCTCAATAAAGTTGCCATGCTTTTTCCTCATGTCTTCTGGGGGGAAGATTTGGATACATTTGGATGTCTTAGAGAACATTTCTATGAACGGGGGGAGTTCTTTTTGTTCTATAGTTACCATGCAGTTTCAGGCTCGGCTGTACTTATAGCGCTCGTGGCTGGTGAAGCTGCTCAAACATTTGAACACACGGAATCGACTACTTTGCTCCACCGCGTTCTTCACATCCTCAGAGGTATTTATGGACGGAAAGGGATTGAAGTGCCGAATCCGATACAAACAATATGTACAAGGTGGGGAAGTGATTCATTTTCTTACGGCTCTTACTCTCATGTTCGAGTCAAGTCATCTGGCACCGACTATGATGTTCTTGCACAGAATGTGACCAACCGGTTGTTCTTCGCTGGAGAAGCAACGACTCGACAATATCCAGCCACCATGCACGGTGCCTTTCTGAGTGGCTTAAGAGAAGCTTCTTGCATATATCGAGCCATGAGGGGACAGCCCAATAGTTCAAAGAAGTTTGCACAGAAGAACATCTCCCCAATTCATGATGTGCTTGGAGATCTTTTCAAAATCCCTGATCTAGCATTTGGGAAGTTGTCATTTGTGTTTGATCCTTCATCGGACGACCCAAAAGCGATCGGGATTATGAGAATGACTCTTGAAAACGGAGGCGAGAGTTTTAAGGAGGAACCGAATTCTCAGATTTATGGATTTATATCCAAAGAGCAGGCAAATGAAATGCAACTGCTGGAAGGAGAAGATGGAAATAGATTATCTTCTCTCATAAAAGAATTTGGCTTGAAGTTAATGGGACATAGTGCTGTCGGAAATATTGGTAACTCCTTGATTTCTAGCATTTCCACAGCACGGAAAGGCCGCTGCCGGAATCGTGGGCCTATGTGGCCACAATATTTTGTCTGA 2226 42.54 MATSVPNTSVSKRSLRKKSGPRNYDENLFDEFIDEHLGSDLRKRNRTREDLEKETETEAMIALSLGFPIDALLEEEIQAGVVRELGGKEQNDYIVVRNHILARWRDNVRIWVSKRQIKETVSIEYEHLISAAYDFLSYNGYINFGVAPSFISQIPEESSEGSVIIVGAGLAGLAAARQLLSFGFKVIVLEARNRPGGRVYTQKMGSDGRFAAVDLGGSVITGIHANPLGVLARQLSIPLHKVRDNCPLYRPDGAPVQKEIDSKIEFIFNKMLDKVTELRQIMGGFANNISLGTVLETLRQLYAVARTTDERQLLDWHLANLEYANAGCLFDLSAAYWDQDDPYEMGGDHCFLTGGNWRLIKALSEKVPIFYGKIVNTIRYGSEGVEVIAGNQVFQADTILCTVPLGVLKQKVIKFEPELPQKKIAAIERLGFGLLNKVAMLFPHVFWGEDLDTFGCLREHFYERGEFFLFYSYHAVSGSAVLIALVAGEAAQTFEHTESTTLLHRVLHILRGIYGRKGIEVPNPIQTICTRWGSDSFSYGSYSHVRVKSSGTDYDVLAQNVTNRLFFAGEATTRQYPATMHGAFLSGLREASCIYRAMRGQPNSSKKFAQKNISPIHDVLGDLFKIPDLAFGKLSFVFDPSSDDPKAIGIMRMTLENGGESFKEEPNSQIYGFISKEQANEMQLLEGEDGNRLSSLIKEFGLKLMGHSAVGNIGNSLISSISTARKGRCRNRGPMWPQYFV 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 42264869 42267797 - BLOR12711 Blo03g01530 58994

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01530 741 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 37 728 - -
Blo03g01530 741 MobiDBLite consensus disorder prediction 1 20 - -
Blo03g01530 741 ProSiteProfiles SWIRM domain profile. 52 153 IPR007526 GO:0005515
Blo03g01530 741 PANTHER FLAVIN MONOAMINE OXIDASE 37 728 - -
Blo03g01530 741 Pfam SWIRM domain 70 144 IPR007526 GO:0005515
Blo03g01530 741 Gene3D - 245 550 - -
Blo03g01530 741 Gene3D - 163 592 IPR036188 -
Blo03g01530 741 SUPERFAMILY FAD-linked reductases, C-terminal domain 431 544 - -
Blo03g01530 741 SUPERFAMILY Homeodomain-like 54 156 IPR009057 -
Blo03g01530 741 SUPERFAMILY FAD/NAD(P)-binding domain 161 599 IPR036188 -
Blo03g01530 741 Gene3D - 57 155 IPR036388 -
Blo03g01530 741 Pfam Flavin containing amine oxidoreductase 170 594 IPR002937 GO:0016491
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01530 - - - zju:107429908 1121.69
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01530 Blo-Chr3:42264869 Blo17g00719 Blo-Chr17:21244016 0 dispersed
Blo03g01525 Blo-Chr3:42187745 Blo03g01530 Blo-Chr3:42264869 1.38E-17 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g282 . Blo03g01530 . Bda09g00486 . . . . . . . . Car01g01002 . . Cpe06g00714 Cpe02g00722 Bhi09g02001 . . . Hepe01g1358 Mch11g1108 . Cla11g01798 Cam11g1864 Cec11g1888 Cco11g1894 Clacu11g2027 Cmu11g1833 Cre11g2239 . Cone9ag0142 . . Lsi04g01286 . . . . . . . . . Bma07g01198 Bma14g00189 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004494 2 2 2 3 1 0 2 1 0 1 1 1 2 1 1 2 0 3 2 1 1 1 1 1 1 1 1 1 1 2 39
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12193 PF01593 Amino_oxidase 2.70E-91 CL0063 Blo TR