Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01541 ATGAAAGAGCGGAAGGTGAACATATCCGGAAAGCCGAAGCATTCGCTTGACGCTAACAGAAAAGATGGGGACAAGGATTCTCGCAGCGCCGCTACCGTACGTCGGCTTAAGATGTATAATACGAGGCCGAAGCGCGATCGTAAAGGAAAGATTTTGAGAAATGAGTTCCAATCGAAAGAGTTGCCCTGCACGCGGATCCAACCTGATCGCCGCTGGTTTGGGAACACTCGAGTTGTAAACCAGAAGGAGCTTGAAATTTTCCGAGACGAGCTTCAGAATCGGATGTCCAGCCAATATAATGTCATTTTGAAGGAGAAAAAGTTGCCTTTGTCCCTCTTGAATGACCATCAGAAGCAATCCAGAGTTCATCTTCTGGATACTGAGCCGTTTGAGGATGCATTTGGACCAAAGAGGAAGAGGAAACGTCCAAAGCTCTTGGCTGCTGATTATGAGGCATTACTTAAAAAAGCCGACGGTTGCCAAGATGCCTTTGAGGAGAAGCATACTGCTAATGAAACTGTAGAAGAAAATGAAGCTGATGGCTTTAAGGACCTTGTTCGACATACAATGTTTGAAAAGGGTCAAAGTAAGCGGATATGGGGTGAGCTCTACAAAGTAATAGACTCATCTGATGTTGTTATCCAGGTTTTGGATGCAAGGGATCCACAAGGAACTAGATGTTACCATTTAGAGAAGCATCTGAGAGAGCATTGCAAGCACAAACACATGGTTCTTTTGTTAAATAAGTGTGATTTAATTCCAGCATGGGCAACAAAAGCTTGGCTCAGAGTATTGTCCAAAGAATATCCTGCTCTGGCATTTCATGCAAGCATCAACAAGTCTTTTGGAAAGGGCTCTCTTCTATCAGTGCTGAGACAATTTGCTCGCCTAAAAAGTGATAAGCAAGCAATTTCAGTGGGATTTATTGGGTATCCCAATGTTGGAAAGTCTTCTGTTATTAACACACTGAGGACAAAAAATGTTTGCAAGGTTGCTCCCATACCTGGAGAAACGAAAGTGTGGCAGTATATAACTCTTACAAAGAGGATATTTTTAATTGATTGCCCTGGAGTTGTTTACCAGAACAAAGACACGGAAACAGATATTGTGCTAAAGGGTGTGGTACGTGTCACAAATTTGGAGGATGCTTCCGATCACATCGGAGAAGTCTTGAAACGTGTGAAGAAAGAGCACCTTGAAAGAGCCTACAGAATAAAAGAATGGAAGGACGACAATGATTTCTTGGTTCAGCTCTGCAAATTCACTGGCAAATTGCTGAAGGGCGGCGAACCTGACTTGACCACCGCTGCCAAAATGGTCCTTCACGACTGGCAAAGGGGTAGGATACCATTTTTCGTCCCACCTCCTCGAGTCGAAGACTCTGCAGAGGAACCAAATAATTATGGTTTATTAGACAAAGACTCGGCAGAAAATAACGAGAAGGCTTCTTCAGCTTTTAAAGCCATTGCCAATGTGATCTCATCTCAGCAGCAAAAAAGTGTCCCCGTCCAAAGAGATCTATTCACTGAAAACGAGTTAAAGGGTGATTCATTTGACCCTAATCCAGCCGCTGCCAATGAAACCAATGAGCAGCTTCCGGCAACTGATAAAGAGTCGCCGGTGCAGTCGTCGGACAACGAGGATGAAGCATCCGAGAAGCTGGTTCTTTTGCTGGGTTATCAGAAAATGATCATTCTCGATACGGAAAGCGAGGAAGTTCGTTTTCAAACGTGTAAATCCTTCTGGGTCTCTGTGTGGCTACGGGATACGGATAGAAAGCCCTTACTCGAGGCTGTGGAAAAAATGAAAGAAGAGTTGATGCTTCTCGGGTTTATTTCTCTCTTTCTGACGGCTACATCGGGTGTGATAGTCGGTATTTGCATGCCTTCGAAATTCTACGAGATTTCATTTGTGCCCTGTACCAAGTCGGAAATCAAAGAAGAACATGAAAGCAAGTCAACTGAAAGCAACGGCTATGAGCCGTTCGTTTCAGAAGAAGTTCTCGAGCAATTGCACCGATTCATCTTTGTAATGGCTATAACACACATATTTTATAGCTGCTTAACAATGCTGCTTGCAATTGTTAAGATTTATAGTTGGAGGAAATGGGAAGACGAAGCACGGATGGACAGACATAATTCCTTACGCGACCTCGCTAGGGAAATGACGATGCGGAGACAAGCAAATTTTGTTAAGTATCATACTTCAAATCCATTAACCAGGAATAAACTTCTCATCTGGGTGAAGCATTTCCTCATGGCAAACAACATTTTGACATTAGAAAATGTAAGTTCTAGAGACTCTTTTTTGTTTTTTCAGTGTATTATTTTTCGATCTCATCAGCGGGTAAAGCCCAACCGAGCCCTCCCGAATTTGGGTCTGAGGTTGAGCCCGCCTATGGGTCAGCTTGAATTTAACATAGCAACGCTAACATGTTTCTTTCGACAATTTGGTCATTCTGTAGATCGTGTTGACTACCTCACGCTCCGTAGGGGTTTTATCATGAATCACAATTTGCGGTTGAAGTATGATTTTCACAACTACATGATTCGCTCCATGGAAGAAGAATTTCAAATGATAGTTGGTGTGAGTGGCCCTCTGTGGGGATTTGTTGTGTTTTTCATGCTCTTCAACATAAAAGGGTCTAACTTCTATTTTTGGATAGCATTCATTCCTATTGGTCTTCAACACGTAGTAGCAACCTTGGCACTGGAGAGTGCGGGAATAACTGGATTTTTTGCGGGAGCAAAACTGAAGCCTCGAGACGAACTTTTCTGGTTTAAAAAGCCAGAGCTCTTATTGTACTTGATTCATTTTATTCTCTTTCAGAATGCATTCGAATTGGCTTCGTTTTTCTGGTTCTGGTGGCAGTTTGGCTACGATTCGTGCTTCATCCAGAATCATTTGATGGTGTACGTTCGACTGTTTTTGGGGTTTGCAGGGCAAATCTTATGCAGCTACAGTACTTTACCGCTGTATGCATTAGTTACACACATGGGAACAAACCACAAGGCAGCCTTGATTCCACAGAATTTAAGAGACAAAATTGAGGGGTGGAAAAAGATGGCGAGAAAGAAGAGACGACACCATGTTTACAATGACAATTCTGCACTTCACACGGATACAAGCACGGTGGTTTCGGTCGAAGAATATGATGAAAACGAAGCATTCGATAATCCGGAGATTGCCCAAGAAATAATCTCGGACACAGAGTCACCGGCATCTGATTCAACAAATGGCCCTGAAACAGTTGCTAATGAAACATCATCGAGGACAGGGGCGCCACTTCTGAGGCCCTCTGCATCCGCCTCTACTTCAATCACGGCGGATTTTAATCTGGAAAATTGTACCAGAAGCTTTTCAATGCCACCAAAGATAGTAACACTACAGCAATAA 3396 43.17 MKERKVNISGKPKHSLDANRKDGDKDSRSAATVRRLKMYNTRPKRDRKGKILRNEFQSKELPCTRIQPDRRWFGNTRVVNQKELEIFRDELQNRMSSQYNVILKEKKLPLSLLNDHQKQSRVHLLDTEPFEDAFGPKRKRKRPKLLAADYEALLKKADGCQDAFEEKHTANETVEENEADGFKDLVRHTMFEKGQSKRIWGELYKVIDSSDVVIQVLDARDPQGTRCYHLEKHLREHCKHKHMVLLLNKCDLIPAWATKAWLRVLSKEYPALAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNKDTETDIVLKGVVRVTNLEDASDHIGEVLKRVKKEHLERAYRIKEWKDDNDFLVQLCKFTGKLLKGGEPDLTTAAKMVLHDWQRGRIPFFVPPPRVEDSAEEPNNYGLLDKDSAENNEKASSAFKAIANVISSQQQKSVPVQRDLFTENELKGDSFDPNPAAANETNEQLPATDKESPVQSSDNEDEASEKLVLLLGYQKMIILDTESEEVRFQTCKSFWVSVWLRDTDRKPLLEAVEKMKEELMLLGFISLFLTATSGVIVGICMPSKFYEISFVPCTKSEIKEEHESKSTESNGYEPFVSEEVLEQLHRFIFVMAITHIFYSCLTMLLAIVKIYSWRKWEDEARMDRHNSLRDLAREMTMRRQANFVKYHTSNPLTRNKLLIWVKHFLMANNILTLENVSSRDSFLFFQCIIFRSHQRVKPNRALPNLGLRLSPPMGQLEFNIATLTCFFRQFGHSVDRVDYLTLRRGFIMNHNLRLKYDFHNYMIRSMEEEFQMIVGVSGPLWGFVVFFMLFNIKGSNFYFWIAFIPIGLQHVVATLALESAGITGFFAGAKLKPRDELFWFKKPELLLYLIHFILFQNAFELASFFWFWWQFGYDSCFIQNHLMVYVRLFLGFAGQILCSYSTLPLYALVTHMGTNHKAALIPQNLRDKIEGWKKMARKKRRHHVYNDNSALHTDTSTVVSVEEYDENEAFDNPEIAQEIISDTESPASDSTNGPETVANETSSRTGAPLLRPSASASTSITADFNLENCTRSFSMPPKIVTLQQ 1131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 42884633 42899729 + BLOR12722 Blo03g01541 59005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01541 1131 MobiDBLite consensus disorder prediction 1069 1107 - -
Blo03g01541 1131 PANTHER GTP-BINDING PROTEIN-RELATED 6 550 - -
Blo03g01541 1131 MobiDBLite consensus disorder prediction 455 474 - -
Blo03g01541 1131 Pfam 50S ribosome-binding GTPase 306 395 IPR006073 GO:0005525
Blo03g01541 1131 MobiDBLite consensus disorder prediction 1 33 - -
Blo03g01541 1131 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 200 361 IPR030378 GO:0005525
Blo03g01541 1131 Gene3D - 190 360 IPR027417 -
Blo03g01541 1131 Pfam NGP1NT (NUC091) domain 38 161 IPR012971 -
Blo03g01541 1131 Gene3D - 361 453 IPR023179 -
Blo03g01541 1131 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 2 6 550 IPR024929 GO:0005730
Blo03g01541 1131 MobiDBLite consensus disorder prediction 1 32 - -
Blo03g01541 1131 MobiDBLite consensus disorder prediction 512 548 - -
Blo03g01541 1131 CDD NGP_1 202 358 - -
Blo03g01541 1131 Pfam Mlo family 808 1038 IPR004326 GO:0006952|GO:0016021
Blo03g01541 1131 Pfam Mlo family 584 752 IPR004326 GO:0006952|GO:0016021
Blo03g01541 1131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 433 IPR027417 -
Blo03g01541 1131 MobiDBLite consensus disorder prediction 522 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01541 Blo-Chr3:42884633 Blo04g00881 Blo-Chr4:10026084 2.93E-92 dispersed
Blo05g00440 Blo-Chr5:6059874 Blo03g01541 Blo-Chr3:42884633 1.55E-58 dispersed
Blo03g01541 Blo-Chr3:42884633 Blo03g01542 Blo-Chr3:42937782 1.78E-78 tandem
Blo07g00524 Blo-Chr7:13485276 Blo03g01541 Blo-Chr3:42884633 1.16E-11 transposed
Blo12g00575 Blo-Chr12:24007468 Blo03g01541 Blo-Chr3:42884633 6.14E-07 transposed
Blo14g00248 Blo-Chr14:2248151 Blo03g01541 Blo-Chr3:42884633 3.24E-31 transposed
Blo03g00649 Blo-Chr3:27578258 Blo03g01541 Blo-Chr3:42884633 3.67E-65 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01541 K14537 - jre:108992948 921.768