Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo03g01556 ATGGCCCCGACAGCCAGATCCTCCGCGCCGGAACCAAACTCGGGTTCGAGCTGTAAGGAAATCAGATATCGAGGGGTAAGGAAGAGGCCATGGGGAAGATACGCCGCGGAGATTCGCGACCCTGGGAAAAAGACTCGGGTCTGGCTAGGGACGTTCGACACAGCGGAGGAGGCGGCTCGTGCTTACGACTCAGCGGCGCGGGAGTTTCGTGGGTCCAAAGCCAAGACTAACTTCCCTACTCCGTCTGAGCTTGTCGGTTTGGATAATAATAACTTCACACGCAGTAGTCCTAGCCAGACAAGCACCGGCGAATCGGCTTCTCCTCCTCCGCCTTTAGACCTTACTCTTACTCCCATTTCCATCACCGCCGGTCGTTTCGCAGGAAGTTGCTACCCTCGTGGTGGTTTCGAGGCCGTTCCCATGGCCCGTTCATTGTACTTCGATGCTTTCGCTCGGTCAGAGAAGATCAGAGTGAATCCCCGAGAAATGCCAATGTTTTATACTGCGATGGTAGCTAATTGCCGGCCGATTATCGTAGGTGGGACTCAAAGCGACACCGATTCATCCTCGATAGTAGATTTCAAGCTAAACCAGAATATTGTACGGCTAGATCTTGATCTTAACCAGCCTCCACCACCTGAAGTGGCATGA 651 53.61 MAPTARSSAPEPNSGSSCKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDSAAREFRGSKAKTNFPTPSELVGLDNNNFTRSSPSQTSTGESASPPPPLDLTLTPISITAGRFAGSCYPRGGFEAVPMARSLYFDAFARSEKIRVNPREMPMFYTAMVANCRPIIVGGTQSDTDSSSIVDFKLNQNIVRLDLDLNQPPPPEVA 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 43268014 43268664 + BLOR12737 Blo03g01556 59020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo03g01556 216 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Blo03g01556 216 MobiDBLite consensus disorder prediction 1 15 - -
Blo03g01556 216 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Blo03g01556 216 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Blo03g01556 216 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Blo03g01556 216 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Blo03g01556 216 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Blo03g01556 216 MobiDBLite consensus disorder prediction 69 113 - -
Blo03g01556 216 MobiDBLite consensus disorder prediction 75 108 - -
Blo03g01556 216 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Blo03g01556 216 MobiDBLite consensus disorder prediction 1 21 - -
Blo03g01556 216 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Blo03g01556 216 PANTHER ERF FAMILY PROTEIN 1 204 - -
Blo03g01556 216 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01556 Blo-Chr3:43268014 Blo04g01217 Blo-Chr4:23070283 6.23E-33 dispersed
Blo06g00650 Blo-Chr6:29508270 Blo03g01556 Blo-Chr3:43268014 2.32E-26 dispersed
Blo08g00212 Blo-Chr8:2478929 Blo03g01556 Blo-Chr3:43268014 1.13E-50 dispersed
Blo13g00356 Blo-Chr13:20956256 Blo03g01556 Blo-Chr3:43268014 2.77E-37 transposed
Blo07g00887 Blo-Chr7:27634893 Blo03g01556 Blo-Chr3:43268014 7.25E-30 transposed
Blo03g00671 Blo-Chr3:28315123 Blo03g01556 Blo-Chr3:43268014 2.92E-130 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12197 PF00847 AP2 2.30E-15 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo03g01556 K09286 - zju:107432572 217.238