Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo04g00025 | ATGGATTTTAGAAACCCAGTTGATAAAGTTTCAAATTTTGAGCTGAATTACCAGTCTTCCTCCCTTAAAAGCGTTTCCTCGTCACATTCGAAGACATCCGGCGGCAATTCTTTGCGGGAAGTGAGTTTTGGGGATATGGAATCAAAACCAGTGCGTTTTGGATCGAGGCGTGCCGATTCTGAAGCTCTTACCATGTCCCAGAAGGAGATCAACGATGAAGATGCTAGATTGGTTCACATAAATAATTCTGGAAAGACAAATGAGAGGTTTGACTTAGCTAGGAATTCAATTCGTACTGCCAAGTATTCATTGATTACTTTCGTCCCCAGAAATCTTTTTGAACAGTTTCATAGAATTGCTTACATTTATTTTCTCATCATTGCCGTGCTTAATCAACTCCCTCAGCTTGCTGTGTTTGGCCGGGGGGTCTCTATTCTTCCACTGGCATTTGTTCTTCTAGTTACAGCAGTTAAGGATGGTTTTGAGGATTGGAGGAGACACCAATCAGATCGGATAGAAAACAATCGTTTAGCTTCTGTTTTGATTAATGATCAGTTTCAACCAAAGAAATGGAAGGATATTACAGTTGGTGAAATCATCAAACTTCACGCAAATGAAACAATTCCTTGTGATATGGTTTTGCTCTCTACTAGTGATCCCACTGGCGTCTCATATGTGCAAACTATTAATTTGGATGGAGAATCAAATTTAAAGACACGATATGCAAAACAAGAGACGTTGTCAAAGATTCCTGAGAAGGAGAAGATTAATGGGTTGATAAAATGTGAGAAGCCAAACAGGAACATTTATGGATTTCAAGCTAACATGGAAATTGATGGAAAGAAACTCTCCCTTGGACCTTCAAACATTGTTCTTCGGGGATGTGAACTGAAGAACACGAGCTGGGCACTTGGTGTTGCAGTCTATTGTGGCAGTGAAACCAAAGCTATGCTCAATAGCTCTGGAGCTCCTTCTAAGAGGAGTCGGCTCGAGACCCATATGAACATAGAGATCATCTTGCTCTCAACTTTCCTCATTGCATTGTGTGCAGTTGTCTCAATTTGTGCTGCTGTTTGGTTCATAAGGAAGGGGGATGAATTGAACACACTGCCTTATTTCAGGAAGGAGGACTTTTCGAAGGGAACAGCTGAAAACTATAACTTTCATATATGGGGACTAGAGACATTATTTGTATTCCTCATGTGTGTCATAGTTTTCCAGATTATGATTCCCATTTCATTGTACATTTCTATGGAGCTTGTCCGGGTGGGTCAGGCATATTTCATGATCAATGATTCAGACATGTACGATGAAGCTTCTAATTCGACATTCCAATGCCGGGCACTGAACATAAATGAGGATTTAGGACAAATTGGATATGTTTTTTCAGACAAAACTGGTACTCTAACTGAGAACAAGATGGAGTTTCAAAGTGCAAGCGTTTGGGGAGTGGATTACAGAGGAGGCATCCATGCCAATTCCCATGGATTATTTGACAATTCTGTTCAAGTTGATGGAAAGATTCTAAAGCCGAGAATGAGGGTGAAGGTTGATCCTGAGCTTCTACAGTTGGTGAAAACTGGAAAGAACACAAAGGAAGGAAAACACATACATGATTTTTTCCTGGCATTGGCTGCATGCAATACCATAGTTCCTATTATTACTGAGACTGCTGATTCGTCCGTGAATTTAATTGATTATCAAGGAGAGTCTCCGGATGAACAGGCATTGGTTTATGCTGCGGCTGCTTATGGTTTTGTGCTTATAGAACGAACGACTGGCCACATAGTAATTGATTTCCAAGGAGAAAGGACGATGTTCAATTTATTGGGGCTGCATGAATTTGATAGTGACCGGAAGCGAATGTCTGTAATATTGGGTTGCCCTGACAACACCTTTAAGGTTTTTGTGAAAGGCGCAGACACCACTATGTTCAAAGTGATAGATAAATCTTCAAACCAGGAAATTATAAGCGCAACTGATGCTCATCTTCATTCTTACTCATCTCTCGGTTTGAGAACACTAGTCATAGGAATGAAGGAGCTAAGCGGCCCAGAATTTGAGCAATGGCATGTGGCCTTTGAAGATGCAAGCACTGCTCTGATGGGCAGGGCTTCACTTCTTCGCAAGCTAAGGACTGTGCCAGAGGTCAGAAATGAAACTAGTGATGGAGTCTCTGCAACTCCAGTGGCTTTGATCATAGATGGTGCAAGCCTGGTTTATGTTCTGGATAGTGAACTTGAGGAACAGCTATTTGAATTGGCTAGTAATTGCTCAGTGGTGCTATGCTGTCGAGTAGCTCCATTGCAAAAGGCGGGCATCGTGGCACTTGTCAAGAAACGAACTTCTGAGATGACACTTGCCATTGGGGATGGTGCTAATGATGTTTCAATGATCCAAATGGCTGATGTGGGGGTGGGCATCAGTGGGCAGGAGGGTCGACAAGCTGTGATGGCATCAGATTTTGCAATGGGGCAGTTTAGATTCTTGGTTCCTCTGCTATTGGTCCATGGTCATTGGAATTATCAGCGGATGGCCTACATGATTTTGTACAATTTTTACAGAAATGCAGTTTTCGTTCTTATTTTATTTTGGTATGTATTATTTACTAGTTTCTCTTTGACAACCGCGATAAACGAATGGAGCAGTATGCTGTATTCTATAATCTATACTTCTCTTCCAACAATTATTGTCGCGATTCTCGACAAGAACCTGAGCCGAATGACTCTTCTAAAGTACCCTCCACTTTATGGGGCTGGGCACAGACAAGAGAGCTACAACTCAAAACTGTTTTGGTTTACCATGATAGACACTGTGTGGCAAAGCATGGCAGTTTTCTTCGTCCCGCTCTTTGCATATTGGGGTAGCACTATTGACGTGTCAAGTATCGGAGATCTTTGGACACTTGCTGTCGTTGTATTGGTCAACTTACACTTGGCCATGGATGTTATCCGGTGGAATTGGATTACTCATGCCGCAATTTGGGGATCCATCGCTGCCACTTTCATTTGTGTTTTGATCATCGATGCCATTCCTTCATTTTTCGGTTACTGGGCCATCTTTCATATTGCTGGCACGGCATCCTTCTGGCTCTGCTTGCTTGCTATCATCGTGGCCGCGTTGATTCCTCGTTTCGTCATGAAAAATCTTTGTCAATATTACGGTGCCAGTGATATTCAGATAGCCAGAGAAGCAGAAAAATATGGAAATCTAAGGGAGAGTGAAGCTGAACACATGGAATTGCACCCTCTTCAGGGATAA | 3261 | 42.13 | MDFRNPVDKVSNFELNYQSSSLKSVSSSHSKTSGGNSLREVSFGDMESKPVRFGSRRADSEALTMSQKEINDEDARLVHINNSGKTNERFDLARNSIRTAKYSLITFVPRNLFEQFHRIAYIYFLIIAVLNQLPQLAVFGRGVSILPLAFVLLVTAVKDGFEDWRRHQSDRIENNRLASVLINDQFQPKKWKDITVGEIIKLHANETIPCDMVLLSTSDPTGVSYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEIDGKKLSLGPSNIVLRGCELKNTSWALGVAVYCGSETKAMLNSSGAPSKRSRLETHMNIEIILLSTFLIALCAVVSICAAVWFIRKGDELNTLPYFRKEDFSKGTAENYNFHIWGLETLFVFLMCVIVFQIMIPISLYISMELVRVGQAYFMINDSDMYDEASNSTFQCRALNINEDLGQIGYVFSDKTGTLTENKMEFQSASVWGVDYRGGIHANSHGLFDNSVQVDGKILKPRMRVKVDPELLQLVKTGKNTKEGKHIHDFFLALAACNTIVPIITETADSSVNLIDYQGESPDEQALVYAAAAYGFVLIERTTGHIVIDFQGERTMFNLLGLHEFDSDRKRMSVILGCPDNTFKVFVKGADTTMFKVIDKSSNQEIISATDAHLHSYSSLGLRTLVIGMKELSGPEFEQWHVAFEDASTALMGRASLLRKLRTVPEVRNETSDGVSATPVALIIDGASLVYVLDSELEEQLFELASNCSVVLCCRVAPLQKAGIVALVKKRTSEMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMAYMILYNFYRNAVFVLILFWYVLFTSFSLTTAINEWSSMLYSIIYTSLPTIIVAILDKNLSRMTLLKYPPLYGAGHRQESYNSKLFWFTMIDTVWQSMAVFFVPLFAYWGSTIDVSSIGDLWTLAVVVLVNLHLAMDVIRWNWITHAAIWGSIAATFICVLIIDAIPSFFGYWAIFHIAGTASFWLCLLAIIVAALIPRFVMKNLCQYYGASDIQIAREAEKYGNLRESEAEHMELHPLQG | 1086 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 262960 | 268509 | + | BLOR12937 | Blo04g00025 | 59053 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo04g00025 | 1086 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 464 | 470 | IPR018303 | - | |
| Blo04g00025 | 1086 | Gene3D | - | 158 | 319 | - | - | |
| Blo04g00025 | 1086 | PRINTS | P-type cation-transporting ATPase superfamily signature | 462 | 476 | - | - | |
| Blo04g00025 | 1086 | PRINTS | P-type cation-transporting ATPase superfamily signature | 789 | 808 | - | - | |
| Blo04g00025 | 1086 | Gene3D | - | 472 | 714 | IPR023299 | GO:0000166 | |
| Blo04g00025 | 1086 | MobiDBLite | consensus disorder prediction | 19 | 39 | - | - | |
| Blo04g00025 | 1086 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 760 | 873 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
| Blo04g00025 | 1086 | Gene3D | - | 721 | 834 | IPR023214 | - | |
| Blo04g00025 | 1086 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 709 | 1084 | - | - | |
| Blo04g00025 | 1086 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 18 | 715 | - | - | |
| Blo04g00025 | 1086 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 469 | 686 | IPR023299 | GO:0000166 | |
| Blo04g00025 | 1086 | Pfam | Phospholipid-translocating ATPase N-terminal | 78 | 143 | IPR032631 | - | |
| Blo04g00025 | 1086 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 709 | 1084 | - | - | |
| Blo04g00025 | 1086 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 18 | 715 | - | - | |
| Blo04g00025 | 1086 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 94 | 711 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
| Blo04g00025 | 1086 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 719 | 1064 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
| Blo04g00025 | 1086 | SUPERFAMILY | HAD-like | 457 | 844 | IPR036412 | - | |
| Blo04g00025 | 1086 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 94 | 1053 | IPR023298 | - | |
| Blo04g00025 | 1086 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 817 | 1053 | IPR032630 | - | |
| Blo04g00025 | 1086 | SUPERFAMILY | Calcium ATPase, transduction domain A | 175 | 316 | IPR008250 | - | |
| Blo04g00025 | 1086 | MobiDBLite | consensus disorder prediction | 19 | 41 | - | - | |
| Blo04g00025 | 1086 | CDD | P-type_ATPase_APLT_Dnf-like | 94 | 949 | - | - | |
| Blo04g00025 | 1086 | Pfam | Cation transport ATPase (P-type) | 570 | 646 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo04g00025 | Blo-Chr4:262960 | Blo11g00712 | Blo-Chr11:8497267 | 7.05E-157 | dispersed | |
| Blo13g00955 | Blo-Chr13:31961219 | Blo04g00025 | Blo-Chr4:262960 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo04g00025 | K14802 | - | tcc:18586933 | 1091.64 |