Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00070 ATGGATTCCTTGAAAGAAGAAAAAAGGAATTTAGATTCTCGACTATGGCATGCTTGTGCTGGTGGAATGGTTGAAATTCCATCCATTGATTCTAAAGTCTTTTACTTTCCTCAGGGCCACGCAGAACAGGCTCATGGGGACTTGGACTTTGGATGTCCTAGAATTTCACCTCTCATTCTCTGCAGAGTTTCTGCAGTTCGATTCATGGCGGATTCAGAGACTGATGAGGTGTTTGCTGAGATGAGTTTGATTCCTTTGAGAAGCAATGATTTTGATCGTGAAGAAGATGACTGGATGGGGAGAAAGAACAAGAGTGAGAGCGAAGAAAAGCATACTTCCTTTGCTAAAACTTTGACTCAATCCGATGCCAACAATGGCGGTGGATTCTCCGCTCCTCGCTATTGCGCAGAAACGATTTTTCCGCCTTTGGACTACTCGGCGAATCCACCAGTTCAAACAATTCAAGCAAAGGATGTTCACGGCCAGACTTGGAAGTTTAGGCATATTTATCGGGGGACTCCTCGCCGCCACCTTTTGACGACTGGATGGAGTAATTTCGTAAATTGCAAGAAGCTTGTGGCCGGAGATTCAATCGTGTTCTTGAAATCGGAGAATGGAGAGCTTCAGATCGGAATAAGGAGGGCCAAGAGGGGAATGGGAGGGCGATTTGATTTCTCAATTCCACCATCGGCGACAAATTTGAGGGGCGATCCGAGAGGACAAGTGACTGCTGAATCGATAATCAAAGTGGTAAATCTTGCTTCGAGTGGGCAGGCTTTTGCGGTGAAGTATTTTCCGTGCTCAAACACACCTGAATTTTTTGTCAAGGCCTCCGCCGTGAGAGCTGCGATGCAAGTTCGATGGTCGACCGGAATGAGGTTCAAGATGGCTTTCGAAACAGAGGATTCCTCTAGAATTAGTTGGTTTATGGGAACTATATCTTCCATCCAACCGGCCGATCCCATCCGGTGGCCTGATTCTCCCTGGAAACTTCTGCAGGTAACGTGGGACGAGCCGGATTTGTTACAGAATGTGAAGTTTGTCAACCCATGGTCAGTAGAGGTGGTGACAAACGTTATACCTTATCACGTCTCCCCCTTTGCACCACAAAGAAAGAAACTAAGGCTTCTGTCCAACCCCTCCCCTTCGACCGACTTCGTCAGCCCACGGGCTGATTTTTTGAGAATGCTAGACGATAATCGTGCAGGCATACAGGGAGCCAGGCATGTTAAATCACTGAATCTTCCATTAAAGGACTCGATGCAATTTCAAGCTACTAATCTACCAATCCAGACGAAATCTTATTGGCCGAATGTGGGAAATCCAATCAAGATTTTGAAAGAAAACGAGATGAAAACACCACGCATCTTATTGTTTGGTCAAGTGATTCTTCCCGGTCAGAGAGTTTCCCAGGGTAACTCTAGAGATACTACCGGAAATACTTCGTCGGAGAAGACAGATGCCTCCTACTGCGCTGCAACTTCACCGCATTGGAATAGTTCGCCGGAAAGTTTATCAGATGCAGGGTTTCTATGGTCCAAAGATCACCAGAAAACTGCTCTCGAGAGTGGCCATCCTAAGGAATTAGTGGATCAATTCATGCGAGATTATTTCGCAATCCCGTAA 1626 46.19 MDSLKEEKRNLDSRLWHACAGGMVEIPSIDSKVFYFPQGHAEQAHGDLDFGCPRISPLILCRVSAVRFMADSETDEVFAEMSLIPLRSNDFDREEDDWMGRKNKSESEEKHTSFAKTLTQSDANNGGGFSAPRYCAETIFPPLDYSANPPVQTIQAKDVHGQTWKFRHIYRGTPRRHLLTTGWSNFVNCKKLVAGDSIVFLKSENGELQIGIRRAKRGMGGRFDFSIPPSATNLRGDPRGQVTAESIIKVVNLASSGQAFAVKYFPCSNTPEFFVKASAVRAAMQVRWSTGMRFKMAFETEDSSRISWFMGTISSIQPADPIRWPDSPWKLLQVTWDEPDLLQNVKFVNPWSVEVVTNVIPYHVSPFAPQRKKLRLLSNPSPSTDFVSPRADFLRMLDDNRAGIQGARHVKSLNLPLKDSMQFQATNLPIQTKSYWPNVGNPIKILKENEMKTPRILLFGQVILPGQRVSQGNSRDTTGNTSSEKTDASYCAATSPHWNSSPESLSDAGFLWSKDHQKTALESGHPKELVDQFMRDYFAIP 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 598266 599991 + BLOR12982 Blo04g00070 59098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00070 541 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 6 527 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo04g00070 541 PANTHER AUXIN RESPONSE FACTOR 16 6 527 - -
Blo04g00070 541 Gene3D - 287 360 - -
Blo04g00070 541 ProSiteProfiles B3 DNA-binding domain profile. 114 216 IPR003340 GO:0003677
Blo04g00070 541 SMART B3_2 114 216 IPR003340 GO:0003677
Blo04g00070 541 CDD B3_DNA 113 214 IPR003340 GO:0003677
Blo04g00070 541 Gene3D - 112 216 IPR015300 -
Blo04g00070 541 MobiDBLite consensus disorder prediction 94 114 - -
Blo04g00070 541 Pfam Auxin response factor 251 333 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo04g00070 541 Pfam B3 DNA binding domain 114 215 IPR003340 GO:0003677
Blo04g00070 541 MobiDBLite consensus disorder prediction 469 501 - -
Blo04g00070 541 SUPERFAMILY DNA-binding pseudobarrel domain 108 218 IPR015300 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00070 Blo13g00924 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00070 Blo-Chr4:598266 Blo18g00211 Blo-Chr18:2065513 4.25E-108 dispersed
Blo01g01167 Blo-Chr1:42834256 Blo04g00070 Blo-Chr4:598266 0 wgd
Blo12g00469 Blo-Chr12:22231390 Blo04g00070 Blo-Chr4:598266 4.07E-180 wgd
Blo13g00924 Blo-Chr13:31721951 Blo04g00070 Blo-Chr4:598266 0 wgd
Blo14g00180 Blo-Chr14:1411907 Blo04g00070 Blo-Chr4:598266 7.80E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12208 PF02362 B3 8.70E-21 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00070 - - gab:108489534 576.63