Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g00099 | ATGATGGGGACGGAGGACGGGTCTGGAAGTACCGCAGCTCCATGCCAGGTTTCTGGCTCGCGGAAAATATTCTGGCGTTCAGCATCGTGGTCCACATCTCGTACCTTTCCTCATAACCCCGATACAGTGGAATTAGGAGTGGATTTGAATGGCAATAGTGCTAACAACAATGGAATAAGCAAAGGATTTCCTGCTCCTATAACCCCCAGATCTCAACAGAATAGCAAGGGAAGGCTATGTTTGCCGCCTTTGCGGCCCTTGTCGATTGCTCGGAGGAGCCTAGATGAGTGGCCAAAGGCAAGCTCGGACGACATTGGGGAGTGGCCATTGCCTTCTACTCCAAGCGGGACAGGGAATGCGGAAAGATTAAAGCTTGATTTGTCAACGATTCAGAAAGTTCCAGACAAGAATGGTGGGCTTCTGAAGAGGGATAAAATAGCTTTCTTTGACAAAGAGTGTTCAAAAGTGGAAGAACATGTTTATCTTGGTGGGGATGCTGTTGCACGAGATAGGGCTATTCTTCTGCAGAACGGAATCACTCACATTTTGAATTGTGTGGGATTCGTCTGCCCTGAATACTTTAAAGCGGATTTTACTTACAGAACTCTATGGTTGCAGGATAGTCCTTCTGAGGATATAACTAGTATTTTATATGATGTTTTTGACTACTTTGAGGATGTTAGAGAGCTAGGTGGAAGGGTGTTTGTTCATTGTTGCCGTGGGGTTTCTCGGTCCACATCGCTGGTGATTGCCTATCTAATGTGGAGAGAAGGTCAGAGCTTTGATGATGCATTTCGGTATGTCAAGGCAGCGAGAGGCATTGCTGATCCAAATATGGGTTTTGCTTGCCAGTTATTGCAGTGCCAAAAGAGAGTCCATGCGTTTCCTTTAAGTCCAAGCTCAGTACTGAGAATGTATAGAATTGCTCCACACTCCCCATATGACCCTTTGCATCTTGTGCCAAAAATGTTGAATGATCCTTCTCCTGCTGCTTTGGATTCAAGAGGTGCATTTATCATTCACACCCCATCTGCAATATATCTTTGGGTTGGCAAGAGTTGTGAGGCGATCATGGAAAGAGACGCGAGGGGAGCTGCTTCTCAGATTGTTCGATACGAGAAAGTGGGAGGGCCGATAACAGTGATCAAGGAAGAGAAAGAGCCAGCTTCTTTTTGGGATTCCTTTTCAAGCCTATTGCCTTTGATGTGTAAATCTGGCAATGGAGTGAATGTGGGGGAATCAGAGGTTGAGATTTTCCCAGGGGAGAGAAAGGTGGATTCATATAACGTTGATTATGAGATTTTCCAAAGAGCTATTTTGGGGGGGTTTGTACCTCCTCTTGCTTCATCAGATAATGAACATGAAACCCACCTTCCTGCCAGTGAAAGCAGTTGGAGCCTGTTGAGGAGGAAGTTTGCTTCTGCTCATATGAAAGAGTCTGTGTCAGCACCCAAAATAGCTCTTTCCCGGGTTTATTCAGATTCTTCGATACTTGCATTTTCATCTGCCAAGCCTCTGCCTTCTTCATCGTCATCATCACCTATTCGTCTCTCTCCTGGCTCAATCTCCTCTGATACATGCACGAGTTCTCAGGACTTTTCAGAAAGCTCCCGTGATTCTCCATCTGAATCTTTATCTGCATCTTCAACTTCGCCCAGCTTGTGCAACGCGTCCCTCTGCTCATTCAAAACGTCCCCTCGTCCGATGCCCAACACTTCAGAAGTTCCCGGTCCAATAATGGCTTCATCAATGAGAACTCAAACATCCCCTTTGAAAAAGTTGTCTCCTTCGCTTGCAGAACGCAGAGGTAGCTTCTCGAAGTTTCTTGAGCTGCCAAAGATGTCTGAAAGGACGAGGGCAACCTGTAACTACTCAAGTTTTCTTTCCAGTGAAGGATACGATGAAAAAGTTATGGCAAAAGAAGCTACTCGCCCATTTGAGGATTCATATAATGTAGGACATGCCATAGACCTTAGAGACAATGATGTAAATCAAGGTATTAGATTGTTTTCTCAGGCTCTAATTTCTTTCTTTTTTTCTTTGATTCTCTCGGTAGTGGCAAGTGGGAGTAATTTGGACAGAATTTCGGACATGGCTCCTAAAGTTGATGGTGCGAAAAAGTCTGATCCTAAAGCTCAAGCCTTGAAAACTGCAAAGGCAGTAAAATCTGGTCCAACCTTTAAGAAGAAAGCTAAGAAGATAAGGACTAAAGTCACATTTCATCGGCCGAAGACATTGAAGAAGGACAGGAACCCCAAGTATCCTCGCATTAGTGCACCCCCAAGAAACAAATTGGACCATTATCAAATTCTGAAGTATCCACTCACTACTGAGTCTGCCATGAAGAAAATTGAGGACAACAACACTCTGGTTTTCATTGTTGATATCCGTGCAGATAAGAAGAAGATCAAAGATGCAGTGAAAAAGATGTATGACATTCAGACCAAGAAAGTGAACACTTTGATCAGGCCTGATGGAACTAAGAAGGCCTATGTCAGGTTGACCCCAGATTATGACGCCTTAGACGTTGCGAACAAGATTGGAATTATCTAA | 2553 | 44.42 | MMGTEDGSGSTAAPCQVSGSRKIFWRSASWSTSRTFPHNPDTVELGVDLNGNSANNNGISKGFPAPITPRSQQNSKGRLCLPPLRPLSIARRSLDEWPKASSDDIGEWPLPSTPSGTGNAERLKLDLSTIQKVPDKNGGLLKRDKIAFFDKECSKVEEHVYLGGDAVARDRAILLQNGITHILNCVGFVCPEYFKADFTYRTLWLQDSPSEDITSILYDVFDYFEDVRELGGRVFVHCCRGVSRSTSLVIAYLMWREGQSFDDAFRYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSVLRMYRIAPHSPYDPLHLVPKMLNDPSPAALDSRGAFIIHTPSAIYLWVGKSCEAIMERDARGAASQIVRYEKVGGPITVIKEEKEPASFWDSFSSLLPLMCKSGNGVNVGESEVEIFPGERKVDSYNVDYEIFQRAILGGFVPPLASSDNEHETHLPASESSWSLLRRKFASAHMKESVSAPKIALSRVYSDSSILAFSSAKPLPSSSSSSPIRLSPGSISSDTCTSSQDFSESSRDSPSESLSASSTSPSLCNASLCSFKTSPRPMPNTSEVPGPIMASSMRTQTSPLKKLSPSLAERRGSFSKFLELPKMSERTRATCNYSSFLSSEGYDEKVMAKEATRPFEDSYNVGHAIDLRDNDVNQGIRLFSQALISFFFSLILSVVASGSNLDRISDMAPKVDGAKKSDPKAQALKTAKAVKSGPTFKKKAKKIRTKVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII | 850 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 855074 | 860106 | + | BLOR13011 | Blo04g00099 | 59127 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g00099 | 850 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 147 | 293 | IPR029021 | - | |
Blo04g00099 | 850 | Pfam | Ribosomal protein L23 | 770 | 831 | IPR013025 | GO:0003735|GO:0005840|GO:0006412 | |
Blo04g00099 | 850 | SUPERFAMILY | Actin depolymerizing proteins | 299 | 401 | - | - | |
Blo04g00099 | 850 | PANTHER | MKPA PROTEIN | 1 | 652 | - | - | |
Blo04g00099 | 850 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 236 | 246 | IPR016130 | GO:0016311|GO:0016791 | |
Blo04g00099 | 850 | Gene3D | Protein tyrosine phosphatase superfamily | 138 | 294 | IPR029021 | - | |
Blo04g00099 | 850 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 211 | 272 | IPR000387 | GO:0016311|GO:0016791 | |
Blo04g00099 | 850 | Pfam | Ribosomal protein L23, N-terminal domain | 711 | 760 | IPR005633 | - | |
Blo04g00099 | 850 | SUPERFAMILY | Ribosomal proteins S24e, L23 and L15e | 767 | 843 | IPR012678 | GO:0003735|GO:0005840|GO:0006412 | |
Blo04g00099 | 850 | MobiDBLite | consensus disorder prediction | 56 | 78 | - | - | |
Blo04g00099 | 850 | MobiDBLite | consensus disorder prediction | 502 | 554 | - | - | |
Blo04g00099 | 850 | MobiDBLite | consensus disorder prediction | 56 | 79 | - | - | |
Blo04g00099 | 850 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 152 | 294 | IPR020422 | GO:0006470|GO:0008138 | |
Blo04g00099 | 850 | Gene3D | Severin | 303 | 398 | IPR029006 | - | |
Blo04g00099 | 850 | CDD | DSP | 153 | 287 | - | - | |
Blo04g00099 | 850 | PANTHER | PROTEIN-TYROSINE-PHOSPHATASE MKP1 | 1 | 652 | - | - | |
Blo04g00099 | 850 | Pfam | Dual specificity phosphatase, catalytic domain | 160 | 290 | IPR000340 | GO:0008138|GO:0016311 | |
Blo04g00099 | 850 | ProSitePatterns | Ribosomal protein L23 signature. | 828 | 843 | IPR001014 | - | |
Blo04g00099 | 850 | Hamap | 50S ribosomal protein L23 [rplW]. | 770 | 850 | IPR013025 | GO:0003735|GO:0005840|GO:0006412 | |
Blo04g00099 | 850 | Gene3D | - | 731 | 850 | IPR012677 | - | |
Blo04g00099 | 850 | SMART | dsp_5 | 152 | 291 | IPR020422 | GO:0006470|GO:0008138 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo04g00099 | Blo13g00894 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00099 | Blo-Chr4:855074 | Blo13g01045 | Blo-Chr13:32771159 | 1.48E-78 | dispersed | |
Blo06g01157 | Blo-Chr6:34983477 | Blo04g00099 | Blo-Chr4:855074 | 8.72E-82 | transposed | |
Blo15g00191 | Blo-Chr15:1972510 | Blo04g00099 | Blo-Chr4:855074 | 7.58E-78 | transposed | |
Blo13g00894 | Blo-Chr13:31492229 | Blo04g00099 | Blo-Chr4:855074 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g00099 | - | - | cmo:103500189 | 880.167 |