Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00107 ATGCGTGAAATCGCGTCTGCCAAACTCGGATGTCCGGTGAAGAACGCCGTGATCACAGTCCCTGCGTATTTCAATGATTCTCAACGACAAGCCACCATTGACGCCGGAGTGATCGCAGGCCTCAACGTCATGCGAATAATCAACGAGCCCACTGCAGCCGCCATTGCTTACGGGCTCGACAAGAAATCCGACACCGGAGGTAGGAAAAGTGTTCTGGTTTTTGATTTGGGTGGCGGAACTCTAGACGTTTCTCTGCTTAGCATTTACCAAGGTAACGTCGAAGTTAAGGCCACTAATGGCGATTCTCATCTTGGTGGAGAAGATTTCGACAATAGAATGGTGAACCGTTTCGTGGATGAGTTTGCGAGGAAGACGAAGCAGGACATAAGAGGAAACCCAAAAGCAATTAGAAGATTGAGAAATTCTTGCGAGGAGGCGAAGATACTTCTCTCAGAAGCAGAAACTGCCCCACTTTCAATCGATTGCTTATACGGTGAAATTGACTTCTCTTCCTCCATAACGCGAGCTATGTTTGTCGAAATCAACCGGGATTTGTTCGAGAAGTGCATGAAAGCTGTCGAAAATTGTTTGGCCGATGCAAATATGGACAAAAGCTACGTTGACGAGGTTGTTCTTGTCGGTGGTTCAACAAGAATTCCACATTTACAGTATCTCTTACAGGAGTTTTTCAAGGGAAAGCAGCTGTCCAAGAGCATTAATCCGGACGAAGCGGTGGCACAAGGAGCGGCAGTCCAGGCGGCAAAGATGACAGGAAAGTTTGACGGAGACTTGGGAAACTTCAACTTCTCAGACGTCACTCCGCTCTCTATCGCCGTCAAAACAGACTCCGGCGAGGCTACAGTTTTGATCCCGAAAAATTCGAAAATTCCGACAGAGAAGAAGTACGTTTGTACTACTTTCGAAGACAATCAAACCGAAATAAAAATCTCTGTTTACGAGGGCGAAGGATTAGATATAGCCGCGAGTAAAAACGTAATTAGATCGATTGAGCTCACCGGTATACCTCCAGCTCCCAAGGGTTCTCAAAAAAATTCATTTTTGTTTCAGATCAACTCCAACGGGATCTTGACAATAACAGCTGAGGATCAGACGAATGGCTCGCGGGATTACAAGAACAACACGACTATCACCATTGAGAGAAGAACAATGTCTGAAGAGGAAATAAAGAAGAACAGTTGGCAAGCTGTACAGGACAAGGCTGAAGACGAGGAGCACGAGAAGAGGGTGAAGGCCAAAAACGCTTTGGAAACTTATGTCTTCAAAATGCAGAATCGCATGGTCAACGATGACGATCTTGGTCTAAGACTTGGGGGGGAAGACAAGGAAACTCTGGAGGATGCAATTCTAAACGTCAATAAATGGCTGCTTGAAAATGAAATGATTGCTGGCGTCGATGACTACGAAAAAACGTTGAAGGAGCTTGGCAATGCTTGTTACCCAATAATTAACAAAATACAGGAGGCTAGCCATTTTCAGCCATCTTCAACTGGCAGCCAAGTTGTTGTCTCAAAGACACTGATGGAATATTGTGATAATCACCCGCATCCAATGGAGCTGAAACTCTCCCAAAAATCCTATTCTTGCGATGGCTGCAAAGAGCCTGGTTTTGGACCTAGATACAGATGCGACAAATGTGATTACGATCTTCACAAAGATTGTATGTTCCCTCTGTAA 1695 45.19 MREIASAKLGCPVKNAVITVPAYFNDSQRQATIDAGVIAGLNVMRIINEPTAAAIAYGLDKKSDTGGRKSVLVFDLGGGTLDVSLLSIYQGNVEVKATNGDSHLGGEDFDNRMVNRFVDEFARKTKQDIRGNPKAIRRLRNSCEEAKILLSEAETAPLSIDCLYGEIDFSSSITRAMFVEINRDLFEKCMKAVENCLADANMDKSYVDEVVLVGGSTRIPHLQYLLQEFFKGKQLSKSINPDEAVAQGAAVQAAKMTGKFDGDLGNFNFSDVTPLSIAVKTDSGEATVLIPKNSKIPTEKKYVCTTFEDNQTEIKISVYEGEGLDIAASKNVIRSIELTGIPPAPKGSQKNSFLFQINSNGILTITAEDQTNGSRDYKNNTTITIERRTMSEEEIKKNSWQAVQDKAEDEEHEKRVKAKNALETYVFKMQNRMVNDDDLGLRLGGEDKETLEDAILNVNKWLLENEMIAGVDDYEKTLKELGNACYPIINKIQEASHFQPSSTGSQVVVSKTLMEYCDNHPHPMELKLSQKSYSCDGCKEPGFGPRYRCDKCDYDLHKDCMFPL 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 917606 919300 + BLOR13019 Blo04g00107 59135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00107 564 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 521 564 IPR002219 -
Blo04g00107 564 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 418 498 IPR029048 -
Blo04g00107 564 SUPERFAMILY Actin-like ATPase domain 1 61 IPR043129 -
Blo04g00107 564 Pfam Hsp70 protein 1 493 IPR013126 GO:0005524|GO:0140662
Blo04g00107 564 Gene3D Actin; Chain A, domain 4 105 188 - -
Blo04g00107 564 Pfam C1 domain 520 561 IPR004146 -
Blo04g00107 564 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 263 418 IPR029047 -
Blo04g00107 564 PRINTS 70kDa heat shock protein signature 348 364 - -
Blo04g00107 564 PRINTS 70kDa heat shock protein signature 79 89 - -
Blo04g00107 564 PRINTS 70kDa heat shock protein signature 207 223 - -
Blo04g00107 564 PRINTS 70kDa heat shock protein signature 239 259 - -
Blo04g00107 564 PRINTS 70kDa heat shock protein signature 16 36 - -
Blo04g00107 564 PRINTS 70kDa heat shock protein signature 266 285 - -
Blo04g00107 564 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 262 423 IPR029047 -
Blo04g00107 564 SUPERFAMILY Cysteine-rich domain 516 562 IPR046349 -
Blo04g00107 564 SUPERFAMILY Actin-like ATPase domain 69 255 IPR043129 -
Blo04g00107 564 ProSitePatterns Heat shock hsp70 proteins family signature 2. 73 86 IPR018181 -
Blo04g00107 564 Coils Coil 136 156 - -
Blo04g00107 564 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 502 - -
Blo04g00107 564 Gene3D - 62 236 - -
Blo04g00107 564 Gene3D - 1 253 - -
Blo04g00107 564 Gene3D - 419 494 IPR029048 -
Blo04g00107 564 MobiDBLite consensus disorder prediction 396 415 - -
Blo04g00107 564 PANTHER HEAT SHOCK PROTEIN 70KDA 1 502 IPR013126 GO:0005524|GO:0140662
Blo04g00107 564 Gene3D - 527 563 IPR043145 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00107 Blo-Chr4:917606 Blo13g01083 Blo-Chr13:32972453 0 dispersed
Blo04g00107 Blo-Chr4:917606 Blo04g00109 Blo-Chr4:925066 0 proximal
Blo02g00791 Blo-Chr2:26819201 Blo04g00107 Blo-Chr4:917606 3.60E-08 transposed
Blo01g01122 Blo-Chr1:40281780 Blo04g00107 Blo-Chr4:917606 0 wgd
Blo12g00432 Blo-Chr12:21867468 Blo04g00107 Blo-Chr4:917606 0 wgd
Blo13g00760 Blo-Chr13:30361850 Blo04g00107 Blo-Chr4:917606 1.72E-165 wgd
Blo14g00125 Blo-Chr14:896917 Blo04g00107 Blo-Chr4:917606 8.32E-165 wgd
Blo04g00107 Blo-Chr4:917606 Blo07g01182 Blo-Chr7:31684260 1.23E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00107 K03283 - jre:108999011 538.88