Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00109 ATGCGTGAAATCGCGGCTGCCAAACTCGGATGTCCGGTGACGAACGCCGTGATCACAGTCCCTGCGTATTTCAATGATTCTCAACGACAAGCCACCATGGACGCCGGTGTGATCGCAGGCCTCAACGTCATGCGAATAATCAACGAGCCTACTGCTGCCGCCATTGCTTACGGGCTCGACAAGAAATTCGCCACCGGAGGTCGGAAAACTGTTCTGGTCTTTGATTTGGGTGGAGGAACTCTAGACGTCTCTCTGCTGAGCATTTACCAAGGTAACATCGAAGTTAAGGCCACTAATGGCGATTCTCATCTTGGTGGAGAAGATTTCGACAATAGAATGCTGAACCATTTCGTGGATGAGTTTGCGAGGAAGAATAAGCAGGACATAAGAGGAAATCCAAAAGCGATTAGAAGATTGAGAAATTCTTGCGAGGAGGCGAAGATACTTCTCTCAGAAGCAGAAACTGCTTCACTTTCTATCGATTGCTTATACGGTGGAGATGACTTCTCTTCCTCCATAACGCGAGCTATGTTTGTCGAAATCAACAGGGATTTGTTCAAGAAGTGCATGAAAGCTGTCGATAATTGTTTGGCCGATGCAAATATGGACAAAAGCTACGTTGACGAGGTTGTTCTTGTCGGTGGTTCAACAAGAATTCCACATTTACAGTATCTCTTACAGGAGTTTTTCAAGGGAAAGCAGCTGTCCAAGAGCATTAATCCGGACGAAGCGGTGGCACAAGGAGCGGCAATCCAGGCGGCAAAGATGACAGGAAAGTTTGACGGAGACTTGGGAAACTTCAACTTCTCAGACGTCACTCCGCTCTCTATAGCCGTCAAAACAGACTCCGGCGAGGCTACAGTTTTGATCCCAAAAAATTCGAAAATTCCGACAGAGAAGAAGTACGTTTGTACTACTTTCGAAGACAATCAAACCAAAATAAAAATACTTGTTTACGAGGGCGAAGGATTAGATATAGCCACGAGAAAAAACGAAATTGGATCGATTGAGCTCACCGGTATACCTCCAGCTCCCAAGGGTTCTCAAAAAAATTCATTTTTGTTTCAGATCAACTCCAACGGGATCTTGACAATAACAGCTGATGATCAGACGAATGGCTCGCGGGATTACAAGAACAAGACGACTATCACCATTGACAGAAGAACAATGTGTAAAGAGGAAATAAAGAAGAACAGCTGGCAAGCTGTACAGTACAAGGCTGAAGACGAAGAGCACAAGAAGAGGGTGAAAGCCAAAAACGCTTTGCAAACTTATGTCTTCAATATGCAGATTTCCATGGTCAACTACGAAGATCTTGGGCGGGAAGACAAGAAAACTCTGGAGGATGCAATTCTAAACGTCAATAAATGGCTTGAAAATGTAGTGATTGCTGGCGTCGATGACTACGAAAAAAAGTTGAAGGATCTTGACAGTGTTTGTTACCCAATAATTAACAAAATACACGAGACTACAAAGGGCAATCTTCAGCTATCTTCAACTGGCAGCCGACGTTACGATACTCCAGGGGATATGACGATTAAGCATTGGAGCCATGAACATGGCCTTAAACTACTGCGGCTAGAGACGCCTTGTATCTGCAATGGGTGTCAAGTTCTAGTGTTCAAACCATGTTACCAATGTGATCAAAATCTCTGCGACTTTCGGCTTCACGAAGAATGTGCGATGGCTTCCTCAAATGGTTTCCACCCGTTTTTCCGAGACTGCGATTTCAAGTTTTACCGGTGCTACCAGAATCCAAACAACGAAACTTGTGATGGTTGCGGGAAGGACGTGAAAGGGTTCTTATATCAGTGCTCTTCTCACAAGAAGCCACACAAGCTACACCCGGGTTGCTTAAAGCTGGAGAAAACCCTAGTTGGACATGGAGTCATGCTTCATCTCACCAAAAGCACATCTTCAAAGTGCGCAAAATGTGGACATAAGGAGGTCTTGACGGGGTTCAAAGGGTGGTCCTATGTTTCGAGTGATGGACAATGCAGCTACCACGTGGCTTGTGTGAAGGACTTGTTCTACGAGCAGTGGAAGGAGAATAATTTCTATGGAAACAATCGGGAAGAAGAAGCGGAAGGTATGAAAACATGGAGAATTTGGAAATGA 2118 44.85 MREIAAAKLGCPVTNAVITVPAYFNDSQRQATMDAGVIAGLNVMRIINEPTAAAIAYGLDKKFATGGRKTVLVFDLGGGTLDVSLLSIYQGNIEVKATNGDSHLGGEDFDNRMLNHFVDEFARKNKQDIRGNPKAIRRLRNSCEEAKILLSEAETASLSIDCLYGGDDFSSSITRAMFVEINRDLFKKCMKAVDNCLADANMDKSYVDEVVLVGGSTRIPHLQYLLQEFFKGKQLSKSINPDEAVAQGAAIQAAKMTGKFDGDLGNFNFSDVTPLSIAVKTDSGEATVLIPKNSKIPTEKKYVCTTFEDNQTKIKILVYEGEGLDIATRKNEIGSIELTGIPPAPKGSQKNSFLFQINSNGILTITADDQTNGSRDYKNKTTITIDRRTMCKEEIKKNSWQAVQYKAEDEEHKKRVKAKNALQTYVFNMQISMVNYEDLGREDKKTLEDAILNVNKWLENVVIAGVDDYEKKLKDLDSVCYPIINKIHETTKGNLQLSSTGSRRYDTPGDMTIKHWSHEHGLKLLRLETPCICNGCQVLVFKPCYQCDQNLCDFRLHEECAMASSNGFHPFFRDCDFKFYRCYQNPNNETCDGCGKDVKGFLYQCSSHKKPHKLHPGCLKLEKTLVGHGVMLHLTKSTSSKCAKCGHKEVLTGFKGWSYVSSDGQCSYHVACVKDLFYEQWKENNFYGNNREEEAEGMKTWRIWK 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 925066 927183 - BLOR13021 Blo04g00109 59137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00109 705 Gene3D - 1 253 - -
Blo04g00109 705 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 498 - -
Blo04g00109 705 Pfam Hsp70 protein 1 487 IPR013126 GO:0005524|GO:0140662
Blo04g00109 705 Gene3D - 420 490 IPR029048 -
Blo04g00109 705 SUPERFAMILY Actin-like ATPase domain 1 61 IPR043129 -
Blo04g00109 705 SUPERFAMILY Cysteine-rich domain 511 569 IPR046349 -
Blo04g00109 705 SUPERFAMILY Actin-like ATPase domain 67 257 IPR043129 -
Blo04g00109 705 Gene3D - 62 236 - -
Blo04g00109 705 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 262 422 IPR029047 -
Blo04g00109 705 PANTHER HEAT SHOCK PROTEIN 70KDA 1 498 IPR013126 GO:0005524|GO:0140662
Blo04g00109 705 ProSitePatterns Heat shock hsp70 proteins family signature 2. 73 86 IPR018181 -
Blo04g00109 705 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 263 419 IPR029047 -
Blo04g00109 705 Coils Coil 136 156 - -
Blo04g00109 705 PRINTS 70kDa heat shock protein signature 266 285 - -
Blo04g00109 705 PRINTS 70kDa heat shock protein signature 16 36 - -
Blo04g00109 705 PRINTS 70kDa heat shock protein signature 79 89 - -
Blo04g00109 705 PRINTS 70kDa heat shock protein signature 207 223 - -
Blo04g00109 705 PRINTS 70kDa heat shock protein signature 239 259 - -
Blo04g00109 705 PRINTS 70kDa heat shock protein signature 348 364 - -
Blo04g00109 705 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 418 492 IPR029048 -
Blo04g00109 705 Gene3D Actin; Chain A, domain 4 105 188 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00109 Blo-Chr4:925066 Blo12g00432 Blo-Chr12:21867468 0 dispersed
Blo04g00107 Blo-Chr4:917606 Blo04g00109 Blo-Chr4:925066 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00109 K03283 - rcu:8279580 552.362