Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g00110 | ATGATTCAGAAATTCGGAGGGGGAAGGCAACCCACAGGTACTCCCTCACTCGCCTGGTCTTCCCTCCTCGTCGTCGTCTCTCTCCTCGCCGGCGCTTCCGTCGTCCACAACATCTGCAAACCCAATCTAGTGACTGTTGTTTCGCTCAATGGTAAAGAAGTTGTTAAGGGTAGCCGTCAGATCAACGATTCCGCTACGGTGGCCGATCTGCTGGAGGCAATTCATGAGCGAACTAAAAAGTTCTACCCTTCAAGGCAGCGGCTTACCCTCCCGCTCCAACTGGGATCAAAAGAGAGGCCAATTGTTCTTAACTACAAGAAACTTCTCAAAGAGTACTGCAGCAACGTCTCCAAAAGCATAACTGTTGTTTTGAAGGATCTAGGTCCGCAAGTTTCATATCGAACACTTTTCTTCTGGGAGTACTTGGGTCCACTAATCCTCTACCCCATTTTTTACTACTTTCCGTCGATCAGTCATGCAACCTCCCCTCTTACCAATGTGTTTAGAAACTGTGCTTATTATTGGAGCTTTGGCTGTTACATTGCTTATTATGTGAATCATCCCCTAATAGGCTTTGGATTGGGCTTAATTTGTCAAATTGAGAACTTTTACTGCCATATTTTACTGAGAAATCTTTGTAGCCCCGAAGGCAATGGAGGGTACCAAATCCGGCTTGGGTTTCTCTTCAATATTGTGACGTGTGCAAATTATACGATTGAGATATACCAGTGGGTTGGATTTAACATTGTGACACCAACTGTTGCCAGTTATGTATTTCTGGTGGTGGCTGCTCTCATCATGACCAATTGGGCTCTTGCAAAACCCCGCCGACTCAAGAAGATGGCTGATACTGAGGACATTCAACCTCTTGTATGTGACAATGGCATAGGAATGGTTAAGGCTGGATTTGCAGGAGACAATGCTCCTCGAGCTGTGTTTCCTAGCATTGTAGGCCGCCCTCGCCACACTGGTGTGATGGTTGGTATGGGTCAGAAAGATGCTTATGTTGGTGATGAGGCTCAATCAAAACGTGGTATTTTGACACTGAAATATCCAATTGAGCATGGTATTGTCAGCAACTGGGATGATATGGAAAAGATCTGGCATCATACTTTCTACAATGAGCTCCGAGTTGGCCCAGAGGAGCACCCTGTGCTCCTAACTGAGGCCCCTCATAACCCAAAGGCCAACCCTGAGCGTGAAATTGTGAGGGATATGAAGGAAAAGTTGGCATACATTGCTCTTGATTATGAGCAGGAAATGGAAACTGCCAAGACTAGCTCATCTGTTCAGAAGAGCTATAAGTTGCCTGATGGACAGGTCATCACCATTGGCGCTGAACGATGCCCAGAGTTTCTTTTCCAGCCATCAATGATCGGAATGGAAGCAGCGGGCATTCATGAAACTACCTACAATTCCATCATGAAGTGTGATGTAGATATCGGGAAAGACTTGTATGGAAACATAGTCCTTTCTGGTGGTTCAACCATGTTCCCAGGAATTGCTGATGGAATGAGCAAGGAAATTTCGGCTCTCGCCCCCAGCAGCATGAAGATTAAGGTTGTGGCACCCCCAGAGAGAAAATACACGTGGATTGCCAAGGCAGAGTATGATGAATCTGGGCCATCAATTGTGCATAGGAAGTGCTTCTAA | 1653 | 46.16 | MIQKFGGGRQPTGTPSLAWSSLLVVVSLLAGASVVHNICKPNLVTVVSLNGKEVVKGSRQINDSATVADLLEAIHERTKKFYPSRQRLTLPLQLGSKERPIVLNYKKLLKEYCSNVSKSITVVLKDLGPQVSYRTLFFWEYLGPLILYPIFYYFPSISHATSPLTNVFRNCAYYWSFGCYIAYYVNHPLIGFGLGLICQIENFYCHILLRNLCSPEGNGGYQIRLGFLFNIVTCANYTIEIYQWVGFNIVTPTVASYVFLVVAALIMTNWALAKPRRLKKMADTEDIQPLVCDNGIGMVKAGFAGDNAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVGPEEHPVLLTEAPHNPKANPEREIVRDMKEKLAYIALDYEQEMETAKTSSSVQKSYKLPDGQVITIGAERCPEFLFQPSMIGMEAAGIHETTYNSIMKCDVDIGKDLYGNIVLSGGSTMFPGIADGMSKEISALAPSSMKIKVVAPPERKYTWIAKAEYDESGPSIVHRKCF | 550 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 928073 | 932477 | + | BLOR13022 | Blo04g00110 | 59138 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g00110 | 550 | Gene3D | Actin; Chain A, domain 2 | 316 | 353 | - | - | |
Blo04g00110 | 550 | PANTHER | ACTIN 3 | 281 | 399 | - | - | |
Blo04g00110 | 550 | PANTHER | ACTIN | 399 | 533 | IPR004000 | - | |
Blo04g00110 | 550 | PANTHER | ACTIN | 281 | 399 | IPR004000 | - | |
Blo04g00110 | 550 | SMART | actin_3 | 287 | 550 | IPR004000 | - | |
Blo04g00110 | 550 | Pfam | Domain of unknown function (DUF4516) | 11 | 43 | IPR027858 | GO:0034551 | |
Blo04g00110 | 550 | CDD | Ubl_TECR_like | 44 | 127 | - | - | |
Blo04g00110 | 550 | Pfam | Actin | 285 | 397 | IPR004000 | - | |
Blo04g00110 | 550 | Pfam | Actin | 399 | 550 | IPR004000 | - | |
Blo04g00110 | 550 | SUPERFAMILY | Actin-like ATPase domain | 393 | 550 | IPR043129 | - | |
Blo04g00110 | 550 | Pfam | 3-oxo-5-alpha-steroid 4-dehydrogenase | 162 | 281 | IPR001104 | GO:0006629|GO:0016627 | |
Blo04g00110 | 550 | ProSitePatterns | Actins signature 1. | 335 | 345 | IPR004001 | - | |
Blo04g00110 | 550 | Gene3D | - | 284 | 548 | - | - | |
Blo04g00110 | 550 | ProSitePatterns | Actins signature 2. | 531 | 539 | IPR004001 | - | |
Blo04g00110 | 550 | PRINTS | Actin signature | 331 | 342 | IPR004000 | - | |
Blo04g00110 | 550 | PRINTS | Actin signature | 343 | 365 | IPR004000 | - | |
Blo04g00110 | 550 | PRINTS | Actin signature | 308 | 317 | IPR004000 | - | |
Blo04g00110 | 550 | PANTHER | ACTIN 3 | 399 | 533 | - | - | |
Blo04g00110 | 550 | CDD | NBD_sugar-kinase_HSP70_actin | 290 | 494 | - | - | |
Blo04g00110 | 550 | ProSiteProfiles | Steroid 5-alpha reductase C-terminal domain profile. | 191 | 272 | IPR001104 | GO:0006629|GO:0016627 | |
Blo04g00110 | 550 | SUPERFAMILY | Actin-like ATPase domain | 285 | 400 | IPR043129 | - | |
Blo04g00110 | 550 | Gene3D | - | 422 | 527 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00110 | Blo-Chr4:928073 | Blo13g00886 | Blo-Chr13:31432644 | 4.04E-77 | dispersed | |
Blo04g00106 | Blo-Chr4:913059 | Blo04g00110 | Blo-Chr4:928073 | 8.22E-143 | proximal | |
Blo04g00108 | Blo-Chr4:922039 | Blo04g00110 | Blo-Chr4:928073 | 2.45E-77 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g00110 | K10258 | - | smm:Smp_161930 | 438.728 |