Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo04g00122 | ATGGCTGAGATTTGCTGCGAGCTTGTCGGGGAAGGTGAAACTTCGGCTACAGTGGAGCCCAGCTCCCGACCTTCGAGACGTCGGAGAATGGAAGCTTGTCCTAGTGCATTAATGGCGGACGCTCCTCTTTCGCCTCAGGCGATCGAGAGCAGCCGAAAACGCCTGAAAGCCGATATCAACTCGCGTAAGTGTGGAAACGCCGTGGAGAATTGTATTCCTGCGATCCATAAGATTGAAGAAAGGGATGAAGAAGATTCCAGTGAGGGAATGGGTCTCTGTACGACTCCATCTGTTTCTCACTCTGCTACTTCGACGATAGTTCTAATGGACAATGAAATTCGTCGTCCTAAGTTCGGGGTGACCGCCGTTTGTGGAGGGAGGAGAGAAATGGAAGATGCGGTCTCAATTCAACTATCTTTTTGCGATGAAAAAGGTGATGATACTGAAAAACTCCATCTTTTCGGGGTGTTCGACGGCCATGGTTGCTCTCATGTGGCGATGAAGTGTAAGAAACGATTACATGAGATTGTAAAAGAAGAGATTAAACAAGAAGGTGAGCACGTGGACTGGAAGAGAACGATGGAGAGGTGCTATGTTCGAATGGACGAGGAGGTGAAGCAGTGGTCTAATGAAGGCCTAAGCTCAAATTGTAGGTGCGAACTTCAAGCTTCTCAGAGCGACGCTGTTGGATCTACGGCTGTTATAGCTGTAGTCACCCCCGACAAAATTATCGTCTCCAACTGCGGCGACTCCCGCGCGGTGCTCTGTCGGAAGGGGAAAGCAATCCCTCTCTCATCTGACCACAAGCCCGATAGACCCGACGAACTGCAACGGATCGAAGCCGCCGGTGGGAGGGTGATTTATTGGGACGTAGCAAGAGTCCTCGGAGTTCTAGCGATGTCCAGAGCTATAGGAGATAATTACCTTAAGCCATTCGTCATCCCGGAACCGGAGGTGACAATAACAGATCGGACGGCGGAGGACGAGTGTCTAATCTTAGCAAGCGACGGACTTTGGGACGTAGTAAAAAACGAAACAGCCTGCAGTGTCGCGCGCATGTGCCTCCGATCACAGAGCCAGGCATCATCAATCACATCGTCGGGAAGAGACGTGGCAACGGATTCCGTCGAAGAGTTGCCGGACAAGGGATGCTCGGACGCCTCGATATTGCTGACGAAGTTGGCATTGGCCAGGCATAGTTCCGATAACATCTCCGTCGTGGTCGTCGATCTGAGGAAATGA | 1242 | 51.21 | MAEICCELVGEGETSATVEPSSRPSRRRRMEACPSALMADAPLSPQAIESSRKRLKADINSRKCGNAVENCIPAIHKIEERDEEDSSEGMGLCTTPSVSHSATSTIVLMDNEIRRPKFGVTAVCGGRREMEDAVSIQLSFCDEKGDDTEKLHLFGVFDGHGCSHVAMKCKKRLHEIVKEEIKQEGEHVDWKRTMERCYVRMDEEVKQWSNEGLSSNCRCELQASQSDAVGSTAVIAVVTPDKIIVSNCGDSRAVLCRKGKAIPLSSDHKPDRPDELQRIEAAGGRVIYWDVARVLGVLAMSRAIGDNYLKPFVIPEPEVTITDRTAEDECLILASDGLWDVVKNETACSVARMCLRSQSQASSITSSGRDVATDSVEELPDKGCSDASILLTKLALARHSSDNISVVVVDLRK | 413 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 1023845 | 1025261 | + | BLOR13034 | Blo04g00122 | 59150 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo04g00122 | 413 | Pfam | Protein phosphatase 2C | 118 | 383 | IPR001932 | - | |
| Blo04g00122 | 413 | PANTHER | PROTEIN PHOSPHATASE 2C 37 | 47 | 413 | - | - | |
| Blo04g00122 | 413 | SMART | PP2C_4 | 107 | 409 | IPR001932 | - | |
| Blo04g00122 | 413 | ProSitePatterns | PPM-type phosphatase domain signature. | 153 | 161 | IPR000222 | GO:0043169 | |
| Blo04g00122 | 413 | CDD | PP2Cc | 117 | 411 | IPR001932 | - | |
| Blo04g00122 | 413 | ProSiteProfiles | PPM-type phosphatase domain profile. | 117 | 411 | IPR001932 | - | |
| Blo04g00122 | 413 | SUPERFAMILY | PP2C-like | 113 | 412 | IPR036457 | - | |
| Blo04g00122 | 413 | Gene3D | - | 104 | 413 | IPR036457 | - | |
| Blo04g00122 | 413 | PANTHER | ALPHABET, ISOFORM E-RELATED | 47 | 413 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo04g00122 | Blo13g00881 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo03g01226 | Blo-Chr3:38515727 | Blo04g00122 | Blo-Chr4:1023845 | 1.39E-125 | dispersed | |
| Blo04g00122 | Blo-Chr4:1023845 | Blo09g00035 | Blo-Chr9:465676 | 3.15E-12 | dispersed | |
| Blo13g00881 | Blo-Chr13:31347934 | Blo04g00122 | Blo-Chr4:1023845 | 0 | wgd | |
| Blo13g01063 | Blo-Chr13:32859847 | Blo04g00122 | Blo-Chr4:1023845 | 3.41E-136 | wgd | |
| Blo14g00107 | Blo-Chr14:745207 | Blo04g00122 | Blo-Chr4:1023845 | 1.01E-127 | wgd | |
| Blo03g01151 | Blo-Chr3:37916954 | Blo04g00122 | Blo-Chr4:1023845 | 1.20E-128 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo04g00122 | K14497 | - | egr:104454324 | 480.33 |