Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00134 ATGTACGTACTTGATCAAACCGTGCGTGTGAACTCGCCATCCGTTCAATCATTTTTAGTCAACAATCGACGGGTACCGGAAAGTAGCTGTCACTGGTGGGAATGGTGCCACCTGCGTAGACAACTGTGGAAGTCGCTCACTCGGTTGGATAAGAAGGAGAATCACCTCTCTCTCCAAGTCATAAATGCCTGCGTATCTTGCTTTCTCTGTTTTGCTGCTATCAATTACGTTGGAGATTCTATAAATGGAGTGGTGGGTTTCTGGCCACCATTGATTCTTATTTTGGGAATATATTATCTGGGGCCAGCTGATATAAAGAGTGCGCTCGGAGCGAGAATTTGGTTACCGCTGGCCGTGATTTGTGTATTTGAGCCTGAGGAGGAAGTGGGAGAGAGCGAGTCGCTGTTGGCTGCGGAAGAAGGTATTATCACTATTCCACCCTCAGGAATGGAGGACGATAAACCCGATTCTGGGTATAAGAAAACCAATGGCAATGATAATTTGGATGTCGAAGTTCCAGAAACTGCCCACCAGATTAGCAGAGATTCATGGTTTCAAGTGGGGTTCGTCCTCACCACGGGGATCAACAGTGCTTATGTGCTGGGATATTCAGGGACTATCATGGTTCCTCTAGGCTGGATTGGTGGAGTTGTTGGTTTGATTATAGCAACGGCAATATCACTTTATGCTAATACTCTTGTTGCCAAGCTCCATGAGTTTGGAGGAAAAAGACATATCAGATACAGAGATCTCGCTGGATTTATTTACGGTAGGAAAGCTTATACCCTTACATGGTTTTTGCAATATGTCAATCTTTTCATGATCAACGTTGGATACATCATTTTGGCTGGTCAGGCCTTGAAGGCTATCTACGTTCTTTTCAGTGATGAACATGTAATGAAGCTTCCATATTTCACTATAATTGCTGGATTTGTATGTGCCTTATTTGCCATTGGGACTCCTCATCTTTCTGCTTTAAGAGTTTGGCTTGGATTTTCAACATTCTTCAGCCTTGTTTATATTGTTGTTGCCTTTGTGCTATCCCTCAAAGATGGTAATAAAGCACCTCCGCGGGATTATAGCATCCCGGGAACTACGACAAGCAAAATCTTCACAACTATTGGAGCATCCGCTAATCTCGTATTCGCGTTTAATACTGGAATGCTTCCTGAGATACAGGCGACTGTTAGACAGCCTGTGGTTAAGAACATGTTGAAAGCCCTCTACTTTCAGTTCACAGTTGGTGTTCTCCCGCTATATGCTGTGACTTTCATGGGATACTGGGCTTATGGATCTTCCACATCATTTTACTTGCTCAACAGTGTAAATGGTCCTCGTTGGGTCAAAGTAATTGCTAATCTTTCTGCCTTCTTCCAAACTGTCATTGCCTTACATATTTTTGCAAGTCCGATGTACGAGTATTTAGACACCAAATTTGGCATTGTGGGAAGTGCTTTGGCGATTAAAAACTTGTCGTTCCGAATTGGAGTTAGAGGTGGGTACTTGGCTTTGACGACATTTGTAGCAGCCCTTCTCCCGTTCCTCGGAGATTTCATGAGCCTCACGGGAGCAGTCAGCACCTTTCCTCTCACCTTCATCCTCGCAAATCATATGTACCTCGTGGCCAAGAAGAGCAAGTTAAATTCTTCGCAGAAGCTATGGCACTGGCTCAATGTTTGTTTCTTTGGCTTAATGTCTGTTGCTGCAGCAATTGCAGCCTTACGCCTCATAGCTGTTGATTCCAAAACTTACCATTCCAAATTAGCAGCCATTATGGCATCTTTCATAATTCAGAAACCTCGACAAAGATCACCTTTCATCAAAGCTGCATTAAAAACGCTTGAAAGCATTGGAGCTTTGGAGCAGTTCATGTTAAAACATAAGAAAGATTATGTAGATTTGCATCGTACAACAGAAAAGGAGAGAGACAGCATTGAGCATGAAGTTAGTGCTTTCATCAAAGCTTGCCAAGAACAAATCAATATTCTTAAAAATAGCATAAGCGATGAGGAAGTGCACTCAAAAGGCTGGCTTGGAGTTACGACTGAAGAATCTAATGCTGACACAGTAGCACACAAACATGGGGTGGTTCTAATTCTGAGTGAGAGACTCCATTCTGTTACATCGCAATATGATCATTTAAGGGCTATTCGTTTCCAAGATATCATTAATAAAGCAATGCCAAGAAGAAAACCCAAACGGATCCCCAATAAAATCTCTTCAAATGCCTCTAAATCAAAAGTCTCTGAGATGAGAGAGCCGGATGATTATGAACCTGAGCCTCTCAGAGTTCAGCAGGAACTCTTGAATGACGAAACACGGGCACTTCAGGCAGAGTTAACTAGTCTTCTCAGTGCAGTTCATGAGACTGAAACAAAAATGGTGGAAATGTCTGCTTTGAATCACCTCATGTCTACTCATGTTTTGCATCAGGCACAACAAATAGAACAACTTTATGAACAGGCAGTTGAAGCGACGAAGAACGTTGAACTCGGAAACAAGCAGCTATCCCAAGCTATCCAGCGAAATAGCAGCAGCAGAACTTTCCTTCTGCTTTTCCTGGTCGTCCTTACCTTCTCCGTCCTTTTTCTTGATTGGTACAGTTGA 2607 42.96 MYVLDQTVRVNSPSVQSFLVNNRRVPESSCHWWEWCHLRRQLWKSLTRLDKKENHLSLQVINACVSCFLCFAAINYVGDSINGVVGFWPPLILILGIYYLGPADIKSALGARIWLPLAVICVFEPEEEVGESESLLAAEEGIITIPPSGMEDDKPDSGYKKTNGNDNLDVEVPETAHQISRDSWFQVGFVLTTGINSAYVLGYSGTIMVPLGWIGGVVGLIIATAISLYANTLVAKLHEFGGKRHIRYRDLAGFIYGRKAYTLTWFLQYVNLFMINVGYIILAGQALKAIYVLFSDEHVMKLPYFTIIAGFVCALFAIGTPHLSALRVWLGFSTFFSLVYIVVAFVLSLKDGNKAPPRDYSIPGTTTSKIFTTIGASANLVFAFNTGMLPEIQATVRQPVVKNMLKALYFQFTVGVLPLYAVTFMGYWAYGSSTSFYLLNSVNGPRWVKVIANLSAFFQTVIALHIFASPMYEYLDTKFGIVGSALAIKNLSFRIGVRGGYLALTTFVAALLPFLGDFMSLTGAVSTFPLTFILANHMYLVAKKSKLNSSQKLWHWLNVCFFGLMSVAAAIAALRLIAVDSKTYHSKLAAIMASFIIQKPRQRSPFIKAALKTLESIGALEQFMLKHKKDYVDLHRTTEKERDSIEHEVSAFIKACQEQINILKNSISDEEVHSKGWLGVTTEESNADTVAHKHGVVLILSERLHSVTSQYDHLRAIRFQDIINKAMPRRKPKRIPNKISSNASKSKVSEMREPDDYEPEPLRVQQELLNDETRALQAELTSLLSAVHETETKMVEMSALNHLMSTHVLHQAQQIEQLYEQAVEATKNVELGNKQLSQAIQRNSSSRTFLLLFLVVLTFSVLFLDWYS 868
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1144653 1152252 + BLOR13046 Blo04g00134 59162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00134 868 PANTHER PROLINE TRANSPORTER 1 160 585 - -
Blo04g00134 868 Gene3D - 770 865 - -
Blo04g00134 868 MobiDBLite consensus disorder prediction 731 758 - -
Blo04g00134 868 Pfam SNARE-complex protein Syntaxin-18 N-terminus 585 645 IPR019529 -
Blo04g00134 868 PANTHER OS05G0424000 PROTEIN-RELATED 160 585 - -
Blo04g00134 868 Pfam Transmembrane amino acid transporter protein 181 574 IPR013057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00134 Blo-Chr4:1144653 Blo08g00032 Blo-Chr8:286959 3.27E-34 dispersed
Blo04g00134 Blo-Chr4:1144653 Blo13g00689 Blo-Chr13:29631439 1.46E-43 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00134 - - mnt:21385463 727.628