Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00175 ATGCTTTTACTGTGGAGCAAGGGACTGCATTGCCGGCCAATGGTCCCCTTTCCTTTCGTTGATCATGTTTTCGCATTTAGGAAAGACGAAATCGGAATAATATCACCAAAACGACGTCGTAAAACTGTTATTATTCCTAAGCAGCTCATAACTAGGTCAGACTCAATCTTGCTATTTGATTTGTTCCACTACCTGGTGAATTTTTTGTCGCCAGACTGTAAGGAAGACATGGGCGGCGACGGTGGGGGTTTTCAACTTGGAACGGTGGGGGCGTTGACGCTATCGGTAGTCTCGTCTGTCTCCATAGTGATCTGCAATAAGGCGCTCATGTCTACCTTGGGTTTCATTTTTGCCACTACTTTGACAAGCTGGCATCTTCTTGTCACCTTTTGTTCTCTTCATGTTGCTTTAAAAATGAAATTTTTTGAGAACAAGCTCTTTGATCAAAGGGTTGTGATGGGCTTTGGCATTCTGAACGGTACCTCAATTGGACTCTTGAATCTTAGCCTGGGGTTTAACTCTGTTGGGTTCTATCAGGTCTACCTTCTATTTTCTATCTACTTTTCACTCTCGATAACTCGTACCATTTTTAGCAACTGTTGGAATTATAGGAGTATTCAGCTTTCTCTCACAGTCCTCCTCCTCGGGGTTGGAATTGCTACAGTAACTGATCTGCAGCTCAATGCTCTGGGCTCAGTTTTGTCTTTTCTTGCCATCATAACAACATGTGTTGCTCAGATTATGACTAATACAATCCAGAAGAAGTTCAATGTTTCTTCGACCCAACTCCTTTACCAGTCTTCTCCCTACCAGACAGCAACCCTGTTAATCTCAGGGCCGTTTCTCGATGGATTTCTGACCGATCGAAACGTGTTTGCTTTTCGATATACCCCTACAGTGTTGTTCTTCATATCGTTATCCTGCCTCATTTCAGTGTCTGTCAATTTTAGTACATTTCTGGTGATTGGGAAGACGTCCCCCGTCACTTATCAAGTACTTGGTCATCTAAAGACATGCTTAGTGTTGGGTTTTGGTTATGTTCTACTAAGTGATCCATTCAGCCGGAGGAATCTCGTCGGAATTATGATGGCACTCGTCGGAATGTTTCTATATTCTTACTTTTGCACGCGGGAAAGTCAGCAGAAGCCTAGCGAGGCACCGGCAAAGCCATCAGAGGAAAAGGAAGAGGAATCCGATCGACTTTTGAAGGTGGAAAACGGAAGAACGGTGGACGCAACAAGCACGGTCGTGGACACGTCAAATTCATTCGATGCTCGAATTGTGGCAAATGCTGCCCCAAGGTGCGTTATAGTTAACTTTATCGGTAAAGAAGTTCATAGTGTTCCTATTGCGGATGAAGAGCTAATGAAAGAATTGATCAATGTTTTAATACCCAACCTTCAATTCATAAGTAACTTTGCTTTTCACTGCATCTATTTTATCAATTTAGGAAGTAGCACGAACATATGGTCTTGTAGAGTTTCTGACTGTTTTTTATTTTGTGTTGTAACTTTACTGTATGAGAAATCACTCACGCATAGGGATAAAGCTATCAAGAGATTCCTTATAAGGAACATTGTGGAGCAGGCTGCTGTAAGGGATGTGCAAGAAGCTTGCGTCTATGATCAATACACTCTCCCTAAGCTTTATGCTAAGATGCAATATTGCGTCTCCTGCGCTATTCACTCACATGTTGTGAGGGTTAGATCTCGTACTGATAGAAGGAATCGCCAGCCTCCACAGCGCTTGATCAGACGCAGAGATGATGCGCCAAAGCCTGGTCAGCCTGGTCAAGGACCTCGGCCTGCTGGGGCTGGGAATCCTAAGGATTCTTGGAAAACAACTCTTCTTCTGGCTTACCAAAGCCTTGGCGTCGTATATGGGGACCTTAGCATTTCCCCTCTTTACGTTTTCAAGAGCACATTTGCTGAGGACATTCAACACTCAGAGACGAACGAGGAGATTTATGGAGCTCTTTCTTTTGTTTTCTGGACTCTTACTCTCGTCCCGCTCTTCAAGTACGTTTTTGTGGTGCTAAGAGCCGATGATAATGGAGAAGGTGGCACGTTTGCATTATATTCATTGCTATGCAGACATGCTAAAGTGAGTCTCCAGCCAAATCGACAGGTTGCCGATGAAGAGCTCTCTACCTATAAATTGGAGCATCCTCCTGAGAAGCAAAGCCATTCGTGGATAAAAAAGCTACTCGAGAGGCACAGAGCTCTGCACACTGCCTTGCTAATCCTTGTTCTTCTCGGTACATGTATGGTAATTGGCGATGGGCTTCTCACTCCTGCCATTTCTGTTTTCTCTGCAGTGTCTGGCCTCGAGTTATCAATGTCCAAAGGCCACCACCTATATGCGGTTGTTCCGATTACGTGCGCTATTTTAGTATGTCTATTTGCACTTCAACACTACGGAACACATCGAGTGGGATTCTTTTTCGCTCCGGTCGTCCTCGCATGGCTGCTCTGCATTAGTGGTCTTGGACTATATAATATAGTCATTTGGAACCCTCGTGTGTATCAGGCTCTTTCTCCATATTACATGTTCAAGTTCTTGGAGAAGACGAGGTTAAGTGGATGGATGTCTTTAGGGGGCATATTGTTATGCATTTCAGGGTCTGAAGCCATGTTTGCAGACTTAGGACACTTCTCATATGCTGCAATTCAGATTGCTTTCACGTTTATCGTATATCCAGCTCTTATATTGGCTTATATGGGCCAAGCAGCTTACTTGTCACAGCATCACCAGCCAACTCATCAAATCAGTTTTTACGTGTCCGTTCCGGAAAGTGTAAGGTGGCCAGTTCTTGGAGTTGCTATTCTGGCTTCAGTGGTGGGCAGCCAGGCAATTATCAGTGGAACATTCTCTATCATTAACCAGAGCCAATCACTTGGTTGTTTTCCAAGAGTCAAGGTTATCCACACCTCAGACAAGATTCATGGCCAAATCTACATTCCCGAGATCAACTGGATGCTAATGATCCTCTGCATTGCCGTAACGATTGGATTTCGAGACACAAAACACCTCGGAAATGCATCCGGTCTTGCTGTGATGACAGTGATGCTGGTGACTACATGCCTCACATCCTTAGTCATTGTACTCTGCTGGCACAAACACTCTCTTGTGGCTCTTTCCTTTCTGCTGTTCTTCGGAACGCTCGAACTACTTTACTTCTCGGCATCACTCATGAAATTCAGAGAAGGTGCTTGGCTACCCATTCTCTTGGCTCTCATCCTAATGACCATGATGTTCGTCTGGCATTATGCGACCATCAAGAAATACGAATTCGATCTCCACAACAAGGTTTCTTTAGATTGGCTTCTTGCATTGGGTCCCAGCCTGGGCATAGCTCGAGTCCCTGGCATTGGCCTGGTCTTCTCCGATCTCACTTCCGGAATCCCTGCCAACTTCTCTCGTCTCGTGACAAATCTCCCTGCTTACCATCGTGTTCTTGTCTTTGTCTGTGTGAAGTCGGTGCCTGTTCCTTATGTTCCGCCAGCTGAGCGATATCTGGTCGGTCGTGTGGGCCCTGCAGCCCATCGCTCATATCGGTGTATAGTTCGGTATGGTTACCGAGATGTCCACCAAGATGTAGATTCCTTTGAAGCGGAACTAGTGGATAGGTTGACCGATTTCATCAACTATGATTGGGGCCAGAAGAACCTGGCCAATGACGGAACCGAGGAGACATCATCCAGAAGCGATGGGTCATCAAATGAATGTAGATTGGCGGTGGTTGGAACAATGACGTATGGTGAAATGGAGGAGAGTCTGCAGCGAGCTAGCGTATCTACAACAGAGAACATTAGAGACGGGATGGAAATGGAACCAATAGATCGAAGAGTGAGGTTCGCCGTTGATGATGAGTCTGAAGCAGATTTCAGGGATGAAAGTTATGCGCTTCTGAGAGACGAAATAGAAGATTTAATGACTGCCCAACAAGCCGGAACTGCATTTATTCTTGGGAACTCTCACGTTCAAGCCAAACAACAGTCGTCGTTGTTGAAAAGGTTGGCCATTAACTATGGATACAACTTCATGAGACGAAATTGCCGTGGACCGGACGTCGCACTTAAGGTTCCTCCGGCATCACTCCTGGAGGTGGGAATGGTTTATGTCGTGTAA 4131 45.24 MLLLWSKGLHCRPMVPFPFVDHVFAFRKDEIGIISPKRRRKTVIIPKQLITRSDSILLFDLFHYLVNFLSPDCKEDMGGDGGGFQLGTVGALTLSVVSSVSIVICNKALMSTLGFIFATTLTSWHLLVTFCSLHVALKMKFFENKLFDQRVVMGFGILNGTSIGLLNLSLGFNSVGFYQVYLLFSIYFSLSITRTIFSNCWNYRSIQLSLTVLLLGVGIATVTDLQLNALGSVLSFLAIITTCVAQIMTNTIQKKFNVSSTQLLYQSSPYQTATLLISGPFLDGFLTDRNVFAFRYTPTVLFFISLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLGFGYVLLSDPFSRRNLVGIMMALVGMFLYSYFCTRESQQKPSEAPAKPSEEKEEESDRLLKVENGRTVDATSTVVDTSNSFDARIVANAAPRCVIVNFIGKEVHSVPIADEELMKELINVLIPNLQFISNFAFHCIYFINLGSSTNIWSCRVSDCFLFCVVTLLYEKSLTHRDKAIKRFLIRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRLIRRRDDAPKPGQPGQGPRPAGAGNPKDSWKTTLLLAYQSLGVVYGDLSISPLYVFKSTFAEDIQHSETNEEIYGALSFVFWTLTLVPLFKYVFVVLRADDNGEGGTFALYSLLCRHAKVSLQPNRQVADEELSTYKLEHPPEKQSHSWIKKLLERHRALHTALLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKGHHLYAVVPITCAILVCLFALQHYGTHRVGFFFAPVVLAWLLCISGLGLYNIVIWNPRVYQALSPYYMFKFLEKTRLSGWMSLGGILLCISGSEAMFADLGHFSYAAIQIAFTFIVYPALILAYMGQAAYLSQHHQPTHQISFYVSVPESVRWPVLGVAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVIHTSDKIHGQIYIPEINWMLMILCIAVTIGFRDTKHLGNASGLAVMTVMLVTTCLTSLVIVLCWHKHSLVALSFLLFFGTLELLYFSASLMKFREGAWLPILLALILMTMMFVWHYATIKKYEFDLHNKVSLDWLLALGPSLGIARVPGIGLVFSDLTSGIPANFSRLVTNLPAYHRVLVFVCVKSVPVPYVPPAERYLVGRVGPAAHRSYRCIVRYGYRDVHQDVDSFEAELVDRLTDFINYDWGQKNLANDGTEETSSRSDGSSNECRLAVVGTMTYGEMEESLQRASVSTTENIRDGMEMEPIDRRVRFAVDDESEADFRDESYALLRDEIEDLMTAQQAGTAFILGNSHVQAKQQSSLLKRLAINYGYNFMRRNCRGPDVALKVPPASLLEVGMVYVV 1376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1442225 1455970 - BLOR13087 Blo04g00175 59203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00175 1376 MobiDBLite consensus disorder prediction 570 609 - -
Blo04g00175 1376 Pfam K+ potassium transporter 620 1195 IPR003855 GO:0015079|GO:0016020|GO:0071805
Blo04g00175 1376 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 608 1376 IPR003855 GO:0015079|GO:0016020|GO:0071805
Blo04g00175 1376 TIGRFAM kup: potassium uptake protein 618 1375 IPR003855 GO:0015079|GO:0016020|GO:0071805
Blo04g00175 1376 PANTHER POTASSIUM TRANSPORTER 2 608 1376 - -
Blo04g00175 1376 MobiDBLite consensus disorder prediction 572 592 - -
Blo04g00175 1376 ProSitePatterns Ribosomal protein S26e signature. 555 562 IPR000892 GO:0003735|GO:0005840|GO:0006412
Blo04g00175 1376 Pfam Ribosomal protein S26e 512 587 IPR000892 GO:0003735|GO:0005840|GO:0006412
Blo04g00175 1376 Gene3D Ribosomal protein S26e 504 596 IPR038551 -
Blo04g00175 1376 Pfam Triose-phosphate Transporter family 98 372 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01284 Blo-Chr3:39134755 Blo04g00175 Blo-Chr4:1442225 8.80E-116 dispersed
Blo04g00175 Blo-Chr4:1442225 Blo11g00671 Blo-Chr11:7429037 0 dispersed
Blo18g00833 Blo-Chr18:24584432 Blo04g00175 Blo-Chr4:1442225 5.02E-47 dispersed
Blo13g00835 Blo-Chr13:31028278 Blo04g00175 Blo-Chr4:1442225 0 transposed
Blo14g00056 Blo-Chr14:340840 Blo04g00175 Blo-Chr4:1442225 7.01E-118 transposed
Blo13g00834 Blo-Chr13:31019806 Blo04g00175 Blo-Chr4:1442225 3.55E-64 wgd
Blo03g01209 Blo-Chr3:38340426 Blo04g00175 Blo-Chr4:1442225 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00175 K03549 - tcc:18587495 1278.85