Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00181 ATGGATCCAGACGCCTTCACCGCCAGCTTATTCAAGTGGGACCCTCGAGCTGCGGTTGGAGGACCATCCATCCGCTTACTGGACCAGGTGGCTACCCCACCCACCGGAGTTGCACCTGTCACCACGACCTTCTCGGTCCGACCGAGGGATCTGGGTGGCCTGGAGGACTTGTTTCAGGCTTACGGCATCAGATATTACACGGCTGCCAAGATAGCGGAGCTTGGGTTTACTGTGAGCACTCTTTTGGACATGAAAGATGGGGAGCTGGAGGAGATGATGAACAGCCTCTCACAGATATTTCGGTGGGACCTCTTGGTGGGAGAAAGGTACGGCATTAAAGCAGCCGTTAGAGCCGAGCGAAGACGATTGGACGATGAAATGGAATCGCGGCGCCGCCACTTACTCTCCGCTGATACTGCTAATAACGCTCTTGATGCACTTTCTCAGGAAGGATTGTCGGAGGAGCATGTGCAGCAGGAGAAGGAGGTGGTGGGGAGTGGAGGAGGAACGAGAGAAGTAATTGTGGCTTCAGAGAGGAAGAAACAGCGGCGTAGGAAGGGGCAGAGAAAAACAATCGTCGATTTCGATAACGACGGAAACGAAGTGGGAGAAGAAGACGACGACGACATCAATGGCGGAAATGGAATGAACGAGAGACAACGAGAACACCCGTTCATTGTAACAGAACCAGGAGAAGTTGCCAGAGGGAAGAAAAATGGCCTAGATTATCTTTTCCATCTATACGAACAGTGCCGAGAATTTCTGATGCAGGTGCAGAATATAGCCAAGGACCACGGCGAGAAATGCCCCACCAAGGTGACAAATCAGGTGTTTAGATACGCGAAGAAAGCCGGAGCGAGCTACATCAACAAGCCCAAAATGCGACACTACGTTCATTGCTACGCCCTGCACTGTCTGGACGAGGCGGCTTCGAATGCGCTGCGGACGGCTTTCAAGGAGAGGGGTGAAAACGTGGGAGCTTGGCGACAAGCGTGCTACAAACCTCTGGTGGCTGTAGCTGCTCGCCAAGGGTGGGACATCGATGCGATATTCAACTCTCATCCACGTTTGGCAATTTGGTATGTCCCTACCAAACTCCGTCAGCTATGTCATTCTGAGCGTAACAGTATTGCAGCTTCGAGCTGTGTCTCCAATGGCCGTGAACTCGTGCCCTTCTGA 1179 52.76 MDPDAFTASLFKWDPRAAVGGPSIRLLDQVATPPTGVAPVTTTFSVRPRDLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLLDMKDGELEEMMNSLSQIFRWDLLVGERYGIKAAVRAERRRLDDEMESRRRHLLSADTANNALDALSQEGLSEEHVQQEKEVVGSGGGTREVIVASERKKQRRRKGQRKTIVDFDNDGNEVGEEDDDDINGGNGMNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLMQVQNIAKDHGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEAASNALRTAFKERGENVGAWRQACYKPLVAVAARQGWDIDAIFNSHPRLAIWYVPTKLRQLCHSERNSIAASSCVSNGRELVPF 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1497225 1498776 - BLOR13093 Blo04g00181 59209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00181 392 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 212 378 IPR035209 GO:0003677
Blo04g00181 392 PANTHER PROTEIN LEAFY 1 387 IPR002910 GO:0003677|GO:0006355
Blo04g00181 392 Pfam Floricaula / Leafy protein SAM domain 50 127 IPR035079 -
Blo04g00181 392 MobiDBLite consensus disorder prediction 177 219 - -
Blo04g00181 392 Gene3D Protein LEAFY 215 384 IPR038276 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo13g00823 Blo-Chr13:30956027 Blo04g00181 Blo-Chr4:1497225 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12220 PF17538 C_LFY_FLO 3.60E-108 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00181 - - qsu:112014158 596.275