Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00186 ATGAATCCGTCTTCCGCCCCAAATCTCCCCTTTCGCGGCTCCTATCACCGACGTGCCCATTCCGAGGTGCATTTTCCAATATCTAACGATATCGATCTGGTTTCTGATCCAATCGACGGTCCATCACCTCCCTTCCCAGACGAGGACGACCTATACACCGCGTTCATGGATATCGAGACGTTGGGATCAAAACTCGATGATCACTCTTTCAAATCCGACAATGCCGGTGGTGCTGGGGCGTTTGAAACTGACGAAGGAGAGAAAAGCCTGAGGCCGAGACACCGATATTGCCATTCGTTAGATGGCTTTTCAATTCTTGACACTGTTGAGGCCAAGAAGGCTATGGCTCCGGAGAAGCTCGCTGAATTATGGACCATTGATCCCAAACGAGCCAAAAGGATTTTGGCAAATAGACAGTCCGCTGCTCGTTCAAAGGAGAGGAAAGCCCATTACATACTAGAGCTGGAGAGAAAGCTTCAAACTCTTCAAACAGAAGCAACCACTCTTTCTGCGCAACTATCACTATTCCAGAGAGATACAACGGGATTGTCGTCCGAAAACAAGGAGCTCAAGCTTCACTTACAAGCCATGGAACAACAAGCTCAGCTGCGCAACGATCTTAATGAAACGCTGAGAAACGAAGTGGAGCGGCTCAAGTTTGTCACTAGCCAATCAACGACACCAGCTCAATCATCTCATTTTGGAATACAGCAAATGCCATACACCCGATCAAGCCCTGCACATCAATTCTCATCAGCCGAGCTTGGCTCGTGGATGTTTAATAAGATGCAGGTTCATGCATTAGAGTCTAATTTTTCAACTTCTCGTCCTCTGCTGCAGGCCACTTCTGAAATGATGCAGCGTGATACCATGGGCCTATTTTAG 885 47.8 MNPSSAPNLPFRGSYHRRAHSEVHFPISNDIDLVSDPIDGPSPPFPDEDDLYTAFMDIETLGSKLDDHSFKSDNAGGAGAFETDEGEKSLRPRHRYCHSLDGFSILDTVEAKKAMAPEKLAELWTIDPKRAKRILANRQSAARSKERKAHYILELERKLQTLQTEATTLSAQLSLFQRDTTGLSSENKELKLHLQAMEQQAQLRNDLNETLRNEVERLKFVTSQSTTPAQSSHFGIQQMPYTRSSPAHQFSSAELGSWMFNKMQVHALESNFSTSRPLLQATSEMMQRDTMGLF 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1515377 1517404 + BLOR13098 Blo04g00186 59214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00186 294 Coils Coil 152 172 - -
Blo04g00186 294 PANTHER BZIP TRANSCRIPTION FACTOR 18 3 292 - -
Blo04g00186 294 SUPERFAMILY Leucine zipper domain 129 183 IPR046347 GO:0003700|GO:0006355
Blo04g00186 294 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 3 292 - -
Blo04g00186 294 SMART brlzneu 125 189 IPR004827 GO:0003700|GO:0006355
Blo04g00186 294 Gene3D - 128 181 - -
Blo04g00186 294 CDD bZIP_plant_RF2 130 179 IPR044759 GO:0003700|GO:0006355
Blo04g00186 294 Coils Coil 194 217 - -
Blo04g00186 294 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 127 190 IPR004827 GO:0003700|GO:0006355
Blo04g00186 294 Pfam bZIP transcription factor 129 187 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00186 Blo-Chr4:1515377 Blo14g00054 Blo-Chr14:325091 8.33E-84 dispersed
Blo12g00626 Blo-Chr12:24519458 Blo04g00186 Blo-Chr4:1515377 9.76E-07 dispersed
Blo04g00186 Blo-Chr4:1515377 Blo13g01015 Blo-Chr13:32501722 1.87E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12222 PF00170 bZIP_1 3.20E-08 CL0018 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00186 - - zju:107414005 323.553