Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00218 ATGGGTGGAAATTCACCATGTGCCTCCTGCAAGCTTTTGAGAAGACGATGTGCAAAGGAATGCATCTTCGCCCCTTATTTTCCCTCTGATGACCCTCATAAGTTTGCCATTGTTCACAAGGTTTTCGGAGCGAGCAACATCAGCAAAATGTTGCAGGAGCTTCCAATTCATCAGAGAGCAGATGCAGTGAGCAGTCTGGTTTATGAAGCTAATGCAAGAATGAGAGACCCAGTCTATGGATGCGTAGGAGCTATATCTTATCTTCAAAGCCAGGTTTCTCAGCTTCAAATGGAACTTGCAGTGGCTCAGGCGGAGATTCTGTGCATCCAAATGCAACAAGAGCCCATGGCTGTGCTGCCAAGTACGTCGCCAGTAAACCCAGATGACAAGTCTTATAATTTTCTCCCAAATAATCTCCCCCAGTATCTCAATTTTGCTTCCTCCACTAATGTAATCCACGACTCTCTCAAAAGGGAGAGCCTTTTCAGCCACGACATGGTTTCTTAG 507 45.76 MGGNSPCASCKLLRRRCAKECIFAPYFPSDDPHKFAIVHKVFGASNISKMLQELPIHQRADAVSSLVYEANARMRDPVYGCVGAISYLQSQVSQLQMELAVAQAEILCIQMQQEPMAVLPSTSPVNPDDKSYNFLPNNLPQYLNFASSTNVIHDSLKRESLFSHDMVS 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1690897 1691575 - BLOR13130 Blo04g00218 59246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00218 168 Coils Coil 85 105 - -
Blo04g00218 168 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Blo04g00218 168 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Blo04g00218 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 161 - -
Blo04g00218 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 1 161 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00218 Blo13g00804 CCT
Blo04g00218 Blo13g00804 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00218 Blo-Chr4:1690897 Blo13g00135 Blo-Chr13:4292002 4.12E-48 dispersed
Blo17g00504 Blo-Chr17:7740135 Blo04g00218 Blo-Chr4:1690897 5.66E-49 dispersed
Blo18g00496 Blo-Chr18:6148715 Blo04g00218 Blo-Chr4:1690897 3.47E-48 dispersed
Blo11g00187 Blo-Chr11:1483719 Blo04g00218 Blo-Chr4:1690897 9.35E-61 transposed
Blo15g00606 Blo-Chr15:14709666 Blo04g00218 Blo-Chr4:1690897 8.60E-56 transposed
Blo13g00804 Blo-Chr13:30805934 Blo04g00218 Blo-Chr4:1690897 4.05E-114 wgd
Blo03g01204 Blo-Chr3:38313917 Blo04g00218 Blo-Chr4:1690897 3.29E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12224 PF03195 LOB 2.40E-42 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00218 - - qsu:112026683 283.878