Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00226 ATGTCTCGTGGAGTTGCGGCACCAAACTCTTCTCTGTTTTCACCTTCCAAAAATTCTTCTTCATTTTTGTACGACTTGTCCTCTGCTTCTTCTAATTCTCTGAGGAACAGCGTCTATGAATCATCGCCATCTGGATCGGTGTCTATTTCTTCGCCCTTTCCAATGGCTTTGCGGCGAACGAGGCAAATGAAAGACGCCTCGAGTACTATTCTTTCCAGGAAGAGGCCGGCGAGGATAGCGGTACCGGTTGTTTCTGTGAATTTCGGAGGCGATGATGATCTTATTGACCAGAGATTCGACCTCGTAGAGGTGGAAGAGGAAGGGTACTCCGTTTACTGTAAGAAGGGGGGATCAAGAACTACAATGGAGGATCGATACTCCGCTGTAGTCAATAAGCGTGAAGATTCTGGACAGGCTTCCTTCTTTGGTGTTTTTGACGGCCATGGAGGAACAAAAGCTGCAGAATTTTCAGCAAAGGAAATAGGAAAGAACATCCTATCTCTAGCAGCTAGAAAAGGCGAAAAGGATCTCGAGCAAGCCATTAAAGAAAGCTACTTAATTACAGACAAACAGTTCTCGGAAGAGGGTGGGAGCGGCGGTACTTGTTGCGTAACTGCATTGATACGAGACGGCGATCTTGCAGTCTCCAACGTTGGCGACTGTCGTGCCGTTTTGAGCAGAAAAGGAATAGCAGAGGCCCTAAGTTCCGATCACCGGCCATCGAGGGACGACGAAAGAAAAAGAATTGAAAACCTGGGTGGTTATGTAGACTGCCGGAACGGAGTCTGGAGAGTGCAAGGATCACTTGCAGTGTCGAGGGGAATCGGCGATAGTCACCTAAAGCAGTGGGTCATATCAGAGCCGGAGACGACAGTCATCGAGATCAACCATGATTGCGAGTTCTTAATCCTCGCTTCTGATGGTCTTTGGGACAAGGTTAGTAACGAGGAAGCAGTAAACCTAGTCCGTCCTCTATGCGTGGGTATTGAAGAGCCCAATCTACTCTCTGCTTGCAAGAAGATGGCTGCGTTATCAATGGCGAGAGGCTCAGCTGATGATATTAGCGTGATGATCATCAAATTGAGTAGCTTCGTTTGGTTGGAGAGTAGACATTCAGATTAG 1122 47.59 MSRGVAAPNSSLFSPSKNSSSFLYDLSSASSNSLRNSVYESSPSGSVSISSPFPMALRRTRQMKDASSTILSRKRPARIAVPVVSVNFGGDDDLIDQRFDLVEVEEEGYSVYCKKGGSRTTMEDRYSAVVNKREDSGQASFFGVFDGHGGTKAAEFSAKEIGKNILSLAARKGEKDLEQAIKESYLITDKQFSEEGGSGGTCCVTALIRDGDLAVSNVGDCRAVLSRKGIAEALSSDHRPSRDDERKRIENLGGYVDCRNGVWRVQGSLAVSRGIGDSHLKQWVISEPETTVIEINHDCEFLILASDGLWDKVSNEEAVNLVRPLCVGIEEPNLLSACKKMAALSMARGSADDISVMIIKLSSFVWLESRHSD 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1763274 1764700 - BLOR13138 Blo04g00226 59254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00226 373 SUPERFAMILY PP2C-like 109 362 IPR036457 -
Blo04g00226 373 SMART PP2C_SIG_2 125 361 IPR001932 -
Blo04g00226 373 CDD PP2Cc 112 361 IPR001932 -
Blo04g00226 373 Pfam Protein phosphatase 2C 113 354 IPR001932 -
Blo04g00226 373 ProSitePatterns PPM-type phosphatase domain signature. 141 149 IPR000222 GO:0043169
Blo04g00226 373 Gene3D - 110 369 IPR036457 -
Blo04g00226 373 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 4 364 - -
Blo04g00226 373 PANTHER PROTEIN PHOSPHATASE 2C 4 364 IPR015655 GO:0004722|GO:0006470
Blo04g00226 373 ProSiteProfiles PPM-type phosphatase domain profile. 108 361 IPR001932 -
Blo04g00226 373 SMART PP2C_4 101 359 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00226 Blo13g00800 CCT
Blo04g00226 Blo13g00800 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00226 Blo-Chr4:1763274 Blo17g00260 Blo-Chr17:2646590 9.50E-78 dispersed
Blo01g00382 Blo-Chr1:4371285 Blo04g00226 Blo-Chr4:1763274 1.98E-65 transposed
Blo13g00800 Blo-Chr13:30736880 Blo04g00226 Blo-Chr4:1763274 0 wgd
Blo03g01176 Blo-Chr3:38069176 Blo04g00226 Blo-Chr4:1763274 3.71E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00226 K17506 - csin:114291970 388.652