Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00239 ATGGCCACCTTCGTTCTTCTTCTTCTTTCCAGTCTTTTCATTTCCACCGTTTTTTCCTTCTTCTTCCTCTTTCTCCGGGCGTGGAGATTACGGCGATCCGCTTTGCCGCCGGGAAATCTCGGCCTGCCCTTTGTCGGTGAGACTCTGCAACTTATCTCTGCTTACAAGACCGAGAATCCAGAACCGTTCATCGACCAGAGGGTGAAGCGGTTCGGTTCCATATTCACGACCCATATTTTCGGCGAGCCGACTGTGTTCTCCACCGATCCAGAAACGAACCGTTTCATCCTTCAAAATGAAGGGAGATTGTTTGAGTGTAGCTACCCAGCCTCGATTTCTAATTTGTTGGGAAGGCATTCGTTGCTGCTGATGAAAGGAGTTCTTCATAGGCGAATGCATTCGCTTACGATGAGCTTTGCGAACTCGACCATCATTCGAGATCATCTTCTTGCAGACATAGACCGGTTGATTCGCCTCAATTTGGAATCTTGGAAAGACCGGGTCCTTCTCATGGAGGAGGCAAAGAAGATAACGTTTGAGGTAGCAGTGAAGCAGTTAATGAGCTTTGATCCTGGTGAATGGACGGAGACTCTGATGAAAGAATACGTCCTTGTTATTGAAGGATTCTTCACTGTTCCTTTGCCTCTCTTCTCCAACACCTACCGCAGAGCCATCAAACTGTCGCTCTGCATACCTCTCTTTCTCTCTCTTCCTAGTTTAGCGAGGGGAAAGGTGGCAGAGGCATTGGGTATGATAGTGAGGGGAAGGAGGAAAGAGAGAGCAGAAGGACAGGTGAAGAATGACATGCTTGATGCTTTGTTGGCCGGAAACGACGGCTTCACCGACGAGCAAATCGTCGATTTCTTGCTTGCCCTTCTCGTCGCCGGCTACGAAACCACTTCTACGATTATGACTCTCGCCGTTAAGTTCCTCACCGAGACCCCTCTCGCATTGTCTCAACTCAAGGAGGAGCACGAGCTGATCGAGGCAAGGAAGGGCGGCTCAGAAGGGCAACTCCAATGGAGTGATTACAAGTCAATGCCATTCACGGAATGTGTTGTTAAAGAAACATTAAGGGTTGCAAATATAATCAGTGGGGTGTTCAGGCGAGCCATGACCGATGTTCATATCAAAGGATATACAATTCCGAAGGGATGGAGGGTTTTCGCTTCGTTCCGAGCAGTGCATTTGGATCATGATCATTTCAAGGATGCTCGAACGTTCAATCCATGGAGGTGGAAGAATGAGGAGAGGAACTCGGGAGGATCAGGCAATGTGTTTATGCCATTTGGAGGGGGTCCAAGGCTATGCCCTGGTTATGAGCTTGGTAGAGTCCAACTCTCTGTTTTTCTCCATCACTTGGTCACCAGATTCAGTTGGGTTCCGGCCGAAGAAGATAAGTTAGTATTTTTCCCGACGACCCGGACGCAGAAACGCTATCCGGTCAATGTTTTCCGTAAGAATGAAAATGCGAATGCTTCTGTGAATTGTAAAGAGCAAATGTGA 1506 48.21 MATFVLLLLSSLFISTVFSFFFLFLRAWRLRRSALPPGNLGLPFVGETLQLISAYKTENPEPFIDQRVKRFGSIFTTHIFGEPTVFSTDPETNRFILQNEGRLFECSYPASISNLLGRHSLLLMKGVLHRRMHSLTMSFANSTIIRDHLLADIDRLIRLNLESWKDRVLLMEEAKKITFEVAVKQLMSFDPGEWTETLMKEYVLVIEGFFTVPLPLFSNTYRRAIKLSLCIPLFLSLPSLARGKVAEALGMIVRGRRKERAEGQVKNDMLDALLAGNDGFTDEQIVDFLLALLVAGYETTSTIMTLAVKFLTETPLALSQLKEEHELIEARKGGSEGQLQWSDYKSMPFTECVVKETLRVANIISGVFRRAMTDVHIKGYTIPKGWRVFASFRAVHLDHDHFKDARTFNPWRWKNEERNSGGSGNVFMPFGGGPRLCPGYELGRVQLSVFLHHLVTRFSWVPAEEDKLVFFPTTRTQKRYPVNVFRKNENANASVNCKEQM 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1860675 1863282 - BLOR13151 Blo04g00239 59267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00239 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Blo04g00239 501 PANTHER CYTOCHROME P450 90A1 14 486 - -
Blo04g00239 501 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 Pfam Cytochrome P450 36 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 SUPERFAMILY Cytochrome P450 28 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 PANTHER CYTOCHROME P450 26 14 486 - -
Blo04g00239 501 Gene3D Cytochrome P450 27 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo04g00239 501 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00239 Blo-Chr4:1860675 Blo04g00919 Blo-Chr4:10866597 1.68E-121 dispersed
Blo18g00728 Blo-Chr18:19129791 Blo04g00239 Blo-Chr4:1860675 7.29E-83 dispersed
Blo19g00313 Blo-Chr19:20136591 Blo04g00239 Blo-Chr4:1860675 9.29E-97 dispersed
Blo05g00060 Blo-Chr5:571026 Blo04g00239 Blo-Chr4:1860675 2.39E-122 transposed
Blo05g00812 Blo-Chr5:29698563 Blo04g00239 Blo-Chr4:1860675 1.41E-108 transposed
Blo04g00148 Blo-Chr4:1227577 Blo04g00239 Blo-Chr4:1860675 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00239 K09588 - tcc:18585886 758.059