Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g00243 | ATGGCATCTGCTTATCGAGATCGAACGACGGAGTTTCTATCTTTGTCTGATACGCTGAAGAAGATCGGACCAATCAAAACAGTTGGCCAAGCTGAAAACGAGACCTCTCCTTATATACCTTCCCGACCTGTCTCTTCCAAGTCCGAATTCAATAGGAAGGCTTCGCAAATTTGTTTCGGAATACATGAGATCTCTCACAAGATTGCTCGACTTGCGCAATTGGCAAAAAGATCATCAATGTTTGATGACCCAATTGTGGAAATACAGGAATTGACCGTTTTCATAAAGAACGATATAACAGCTTTGAATGTAGCTCTCTCTGATCTACAAACTATTCAAAACATGGAAATGGCCGATGGAAGCTATTCTGAGGATAAAGTTGTTCACTCAACAGCTGTTTGTGATGACTTGAAAAACAGACTCATGGGGGTTACTAAACATCTTCAAAATGTGTTAACAACAAGAACAGAGAACATAAAAGCAAATGAGAGTAGGAAGCAGATATTCTCCGCAACTGTAACTAAAGAAAATGCTTCTCAAAACCATGCAAAGACAGTGTCTCAGCCACCACCGTGGTTAATTTCATCAAATACATCTGAGAGTTCTCAACCACCAACATTGCCAGTAAATGGAGCCCAATTTGGTAGTCAACTGAGGAGAAGGTTAGCTGTTGAAAACACTCCATCCCAGCATATGGAAATGTCAATGTTACAGCAGGAGGTTCCAAGACAGGAAAATTATTCAGAAAGTCGTGGGGTTGCTCTCCATAATGTTGAATCCACGATATCAGAACTCAGTGGAATCTTTACGCATTTGGCTACAATGGTTGCTCATCAAGGGGAACTGGCCATCAGGATTGACGATAACATGGATGAATCGTTGGCTAATGTCGAAGGGGCTCGCAGCTCTCTGTTAAGGCATCTCAACCGAATATCGTCAAATAGGTGGCTTGTCATCAAAATATTTGGGATAATTATAATTTTTCTAATGGTATTTATTTTTTTCATGGCCTGA | 1014 | 40.63 | MASAYRDRTTEFLSLSDTLKKIGPIKTVGQAENETSPYIPSRPVSSKSEFNRKASQICFGIHEISHKIARLAQLAKRSSMFDDPIVEIQELTVFIKNDITALNVALSDLQTIQNMEMADGSYSEDKVVHSTAVCDDLKNRLMGVTKHLQNVLTTRTENIKANESRKQIFSATVTKENASQNHAKTVSQPPPWLISSNTSESSQPPTLPVNGAQFGSQLRRRLAVENTPSQHMEMSMLQQEVPRQENYSESRGVALHNVESTISELSGIFTHLATMVAHQGELAIRIDDNMDESLANVEGARSSLLRHLNRISSNRWLVIKIFGIIIIFLMVFIFFMA | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1874000 | 1876594 | - | BLOR13155 | Blo04g00243 | 59271 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g00243 | 337 | Pfam | SNARE domain | 282 | 333 | IPR000727 | - | |
Blo04g00243 | 337 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 245 | 307 | IPR000727 | - | |
Blo04g00243 | 337 | PANTHER | SYNTAXIN | 4 | 336 | IPR045242 | - | |
Blo04g00243 | 337 | SMART | tSNARE_6 | 240 | 307 | IPR000727 | - | |
Blo04g00243 | 337 | CDD | SNARE_syntaxin5 | 248 | 336 | - | - | |
Blo04g00243 | 337 | Gene3D | - | 45 | 300 | - | - | |
Blo04g00243 | 337 | SUPERFAMILY | t-snare proteins | 48 | 300 | IPR010989 | GO:0016020|GO:0016192 | |
Blo04g00243 | 337 | PANTHER | SYNTAXIN-31 | 4 | 336 | - | - | |
Blo04g00243 | 337 | ProSitePatterns | Syntaxin / epimorphin family signature. | 251 | 290 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00243 | Blo-Chr4:1874000 | Blo17g00037 | Blo-Chr17:220725 | 1.21E-73 | dispersed | |
Blo04g00243 | Blo-Chr4:1874000 | Blo18g00047 | Blo-Chr18:315482 | 8.70E-86 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g00243 | K08490 | - | mnt:21409051 | 465.692 |