Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00266 ATGGCGAATCGATGGTGGACGGGTAAAGTAGCCATGAGAGGCGTGAACCCTATGTCTTCCTCTCCACCATTTCAGATGAGAAAAGCAGAAGAAGAGAGTGTAGGACTGAACATGTTTGCAACGAGGAGAGAGCAAGAGCTATTCATGGATTCTCACACCAACTCAACCCCTACGAACAGTAGCACGAGTAACCCCAACTCTACACCTCATAAACAAAGCCTCGAGGACGAAGATAGCCGTGAAAATTATCGGGAAACTGAAGATCCAATCACTGGCGGCGTTGAGATCGTCGGCACCAGTGGCAATCGCCGGCCTCGTGGGCGACCACCAGGGTCCAAAAACAAGCCTAAACCACCAATCGTCGTTACTAAAGAGAGCCCAAATGCTCTCCGAATCCACGTCTTGGAAATTAGCACGGGCAGTGACATCGTCGAAAGCATCTCCACCTTCGCCCAACGCCGCCACCGAGGAGTCTCCGTTCTAAGCGGCAGTGGCATTGTCACAAACGTCTCTTTTCGGCAGCCTGCTGCCCCAAACGGGGTCATCACTCTCACTGGCCGATTTGAGATTTTGTCTCTATCTGGGGCGTTTTTACCTGCACCGGCTCCTCCTGGAGCTACTGGACTGACCGTGTATTTAGCCGGAGGGCAAGGTCAGGTGGTCGGTGGCATAGTGCTGGGTTCGCTTATGGCATCTGGTCCAGTTATGGTGATCGCAGCAACTTTTACTAATGCTACTTATGAGCGATTGCCAATCGAAGATGAGCTGCCAAATGATGATCAGGCAGCCCAATTACAGACCCAATCAGCGTCTCAAAGCATGGATGATCAACCTCCAATGCCCACCTACAATATGCCTCCTCATTTGATACCAAATAGCCAGATGCCTTCTGATGTTTTCTGGGTTTCTCCCCCTCGCCCCCCTCACTCTTACTGA 936 51.5 MANRWWTGKVAMRGVNPMSSSPPFQMRKAEEESVGLNMFATRREQELFMDSHTNSTPTNSSTSNPNSTPHKQSLEDEDSRENYRETEDPITGGVEIVGTSGNRRPRGRPPGSKNKPKPPIVVTKESPNALRIHVLEISTGSDIVESISTFAQRRHRGVSVLSGSGIVTNVSFRQPAAPNGVITLTGRFEILSLSGAFLPAPAPPGATGLTVYLAGGQGQVVGGIVLGSLMASGPVMVIAATFTNATYERLPIEDELPNDDQAAQLQTQSASQSMDDQPPMPTYNMPPHLIPNSQMPSDVFWVSPPRPPHSY 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2021023 2021958 + BLOR13178 Blo04g00266 59294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00266 311 MobiDBLite consensus disorder prediction 35 122 - -
Blo04g00266 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 51 307 - -
Blo04g00266 311 CDD DUF296 131 214 IPR005175 -
Blo04g00266 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 51 307 IPR014476 GO:0003680
Blo04g00266 311 MobiDBLite consensus disorder prediction 261 311 - -
Blo04g00266 311 MobiDBLite consensus disorder prediction 261 279 - -
Blo04g00266 311 Gene3D - 130 260 - -
Blo04g00266 311 ProSiteProfiles PPC domain profile profile. 127 268 IPR005175 -
Blo04g00266 311 MobiDBLite consensus disorder prediction 71 88 - -
Blo04g00266 311 MobiDBLite consensus disorder prediction 50 70 - -
Blo04g00266 311 Pfam Plants and Prokaryotes Conserved (PCC) domain 131 244 IPR005175 -
Blo04g00266 311 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 253 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00121 Blo04g00266 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00096 Blo-Chr1:1373199 Blo04g00266 Blo-Chr4:2021023 7.11E-82 dispersed
Blo04g00266 Blo-Chr4:2021023 Blo12g00363 Blo-Chr12:19811216 6.16E-78 dispersed
Blo12g00730 Blo-Chr12:25644970 Blo04g00266 Blo-Chr4:2021023 7.92E-40 dispersed
Blo01g01651 Blo-Chr1:56304124 Blo04g00266 Blo-Chr4:2021023 2.07E-58 transposed
Blo04g00121 Blo-Chr4:1017347 Blo04g00266 Blo-Chr4:2021023 4.64E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00266 - - qsu:112039774 351.673