Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00287 ATGTCAGTGGAGGTGTTGGTAAAAGTGTTTAATGAAGGGAAGCCATTTCTGGCTGTGATTTTGTTGCAGTTTGGGTTTGCAGGAATGTCCATTATTACTAAGTTTGCTCTAAACCAAGGAATGAGTCAACATGTGTTGGCCGTTTATCGTAATGCTGTTGCCACCTTAGTGTTTGCTCCTTGCGCCCTTGTCCTCGAAAGGAAAGTAAGACCAAAGATGACGTATTCCATCCTTTGGAAGATCGTGTTGCTGGGTTTGTTGGAGCCAGTGCTCGATCAGAATTTGTATTACACTGGTATGAAGTACACAACAGCAACTTTCACAGCTGCCATGACCAATGTCCTTCCTGCTTTTGCATTCTTAATGGCTTGGGCTTTGAGGCTTGAGAAGGTTGATATAAGGAGACTTTACAGCCAGGCAAAGATAATAGGAACTATTGTGACAGTAGGAGGAGCAATGCTTATGACTTCAATCAGAGGGCCTAATTTGAATCTTCCATGGACAAAGCAAGATCAAAACAATCATATTCACACTTCTTCTAGCTTACCCATTAATCAAGATCCCATCAAAGGCGCTTTAATGATCTCAGCTGGCTGTATTTTCTGGTCTGGTTTTGTCATTCTCCAAGCAATCACGCTAAAATCTTACCCGGCAGCGCTTTCATTAACGTCCTGGATTTGCCTTACGGGTATGGTCGAAGGATCAGTGCTGGCTTTGGCAATTGAATGGAAGAATCCTGCAGCTTGGTCCATACACTTGGACACTAAATTATTAGCTGCTCTCTACGGCGGTATAGTATGTTCAGGAATTGCATATTATGTTCAAGGAGTGATAATGAAGAAGAGAGGACCTGTTTTTGTTACTGCCTTCATCCCACTTTCCATGGTTATTGTTGCAGTAATGGGTTCTTTCATGTTGTCCGAGATAATATACTTGGGAAGGGCGATTGGAGCAATCGTGATTGTGTTTGGATTGTACCTCGTGTTGTGGGGAAAGAGCAAGGACCACCTTCCATCCGACACAGGAAGTGAAAGAGTACGACCGTCGGATCAAGAAATGGGCGATCCGGATGAAACAGACAAGGCTTCAAATCAAGAATTTGTGGCCATTGATTTTGGTAGAGTTTGA 1128 43.17 MSVEVLVKVFNEGKPFLAVILLQFGFAGMSIITKFALNQGMSQHVLAVYRNAVATLVFAPCALVLERKVRPKMTYSILWKIVLLGLLEPVLDQNLYYTGMKYTTATFTAAMTNVLPAFAFLMAWALRLEKVDIRRLYSQAKIIGTIVTVGGAMLMTSIRGPNLNLPWTKQDQNNHIHTSSSLPINQDPIKGALMISAGCIFWSGFVILQAITLKSYPAALSLTSWICLTGMVEGSVLALAIEWKNPAAWSIHLDTKLLAALYGGIVCSGIAYYVQGVIMKKRGPVFVTAFIPLSMVIVAVMGSFMLSEIIYLGRAIGAIVIVFGLYLVLWGKSKDHLPSDTGSERVRPSDQEMGDPDETDKASNQEFVAIDFGRV 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2192645 2194455 + BLOR13199 Blo04g00287 59315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00287 375 MobiDBLite consensus disorder prediction 337 365 - -
Blo04g00287 375 MobiDBLite consensus disorder prediction 337 364 - -
Blo04g00287 375 PANTHER WAT1-RELATED PROTEIN 11 341 IPR030184 GO:0016021|GO:0022857
Blo04g00287 375 Pfam EamA-like transporter family 16 155 IPR000620 GO:0016020|GO:0016021
Blo04g00287 375 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Blo04g00287 375 PANTHER WAT1-RELATED PROTEIN 11 341 - -
Blo04g00287 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
Blo04g00287 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 334 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00287 Blo13g00756 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01133 Blo-Chr1:40830875 Blo04g00287 Blo-Chr4:2192645 2.15E-127 dispersed
Blo04g00287 Blo-Chr4:2192645 Blo09g00357 Blo-Chr9:14229033 3.83E-115 dispersed
Blo13g00756 Blo-Chr13:30324989 Blo04g00287 Blo-Chr4:2192645 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00287 - - twl:119989988 494.967