Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00301 ATGAAGATTGTATCACCTTGCTGGAGACCTTCAGTTGAAGGTGAAAAGTCCAGTGGAGGGGGAGACTCAAACGGGAGGGTTGATGGGTTACTGTGGTACAAAGATTATGGACGACACATGAATGGGGAATTCTCCATGGCAGTAGTTCAAGCAAACAACTTATTGGAAGATCATTGCCAACTTGAATCAGGGCTGATAAGCTTCTCTGAATCGGGTCCTCAAGGAACATTTGTTGCTGTTCGTGATGCAGAACTCACTTCAGAAAATCAAGGATTATCAACCGAAGTTATTAACAAGGCTTTCTTGGCAACAGAAGAAGAATTCCTATCTCTTGTGAAGAATCAATGGGCCAATAAGCCACAGATTGCTTCTGTTGGTTCATGTTGTTTGGTGGGTATAATATGTGGTGGATTTCTATATATTGCAAATGCAGGAGATTCTCGGGCTGTTTTAGGCAGACTCGAGAAGACTGTTAAAGAAGTCAAAGCGATACAATTATCAGCAGAGCACAATGCAAGCATGGAATCTGTGAGAGAGGAGTTGCGCTCTTTGCATCCAGATGATCCACAGATTGTGGTCTTGAAGCACAAGGTTTCTAGATCTATTGGTGATGCCTATTTGAAGAGGGCAGAGTTCAATCAGGAGCCTTTGTTACCTAAGTTTAGATTGTCACAACCATTCCACAAGCCGATTCTTAAAGCTGAGCCCACAATTTCAGTGGAGAAGCTTTGTTCTGAAGATCAGTTTTTAATATTTGCATCAGATGGCTTATGGGAGTATCTAACCAATCAAGAGGCTGTTGATATCGTGCAGAGCTGTCCCCGTAGTGGAATTGCAAGAAAACTAGTGAAAACAGCATTGTGTGAAGCAGCAAAGAAGAGAGAAATGAGATACTCAGATTTGAAGAAGATAGATAGAGGCGAGCTCATGGAGTGGCCCTATGCTATCAATCAGATGGGGAAGAGGGATTTCTGTCCAGTCATAGTCTCGAGGTCTGGTGAGTTCAGCGCGAACCACGAAGTCATTGGAGAGACTGGAAATGGAAGCAATGTTGGAGTAGAGCTCAACGGCGATATTCTGAGGGTTAAGATTTTCGTCTTCCATGTTTTCGGAGGCTATGTTTCGGCCATTGTCGATATAGTTACAGGACTCGGAGTGCTCTGA 1164 43.47 MKIVSPCWRPSVEGEKSSGGGDSNGRVDGLLWYKDYGRHMNGEFSMAVVQANNLLEDHCQLESGLISFSESGPQGTFVAVRDAELTSENQGLSTEVINKAFLATEEEFLSLVKNQWANKPQIASVGSCCLVGIICGGFLYIANAGDSRAVLGRLEKTVKEVKAIQLSAEHNASMESVREELRSLHPDDPQIVVLKHKVSRSIGDAYLKRAEFNQEPLLPKFRLSQPFHKPILKAEPTISVEKLCSEDQFLIFASDGLWEYLTNQEAVDIVQSCPRSGIARKLVKTALCEAAKKREMRYSDLKKIDRGELMEWPYAINQMGKRDFCPVIVSRSGEFSANHEVIGETGNGSNVGVELNGDILRVKIFVFHVFGGYVSAIVDIVTGLGVL 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2349978 2355089 + BLOR13213 Blo04g00301 59329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00301 387 Pfam Protein phosphatase 2C 88 292 IPR001932 -
Blo04g00301 387 SMART PP2C_4 37 330 IPR001932 -
Blo04g00301 387 Gene3D - 34 329 IPR036457 -
Blo04g00301 387 PANTHER ALPHABET, ISOFORM E-RELATED 4 311 - -
Blo04g00301 387 ProSiteProfiles PPM-type phosphatase domain profile. 43 332 IPR001932 -
Blo04g00301 387 MobiDBLite consensus disorder prediction 1 22 - -
Blo04g00301 387 CDD PP2Cc 44 287 IPR001932 -
Blo04g00301 387 SUPERFAMILY PP2C-like 77 288 IPR036457 -
Blo04g00301 387 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 4 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00301 Blo-Chr4:2349978 Blo07g01413 Blo-Chr7:34152304 2.14E-135 dispersed
Blo13g00743 Blo-Chr13:30209293 Blo04g00301 Blo-Chr4:2349978 5.22E-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00301 K01102 - jre:109013075 503.056