Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00315 ATGAAGGTGGAGGCCAAGAAGGAGGCGGAAGACGAGCAGGACGTGGATCTTCGAGGTTCCGAAATCGTCTTCAGTTTTCAAAATCTTAGGGATTCGAAAGAAACGCAGACGTGTCAGATTTGTATTGGTTCTTTATGGTTGACCATTTTCTCTCAGAATGGCCTCAGGAACTTCACATCTCTGAAAATGGCTTCCAACACCTTAATGAGCTGCGGAATCGCTGCAGTGGCACACCCGTCGGTCCTCTCGTCTTCCAAATCGAAGTTTGCCGCCACATTCGCACTTCCTTCGGTATTTGCCAATGCGTCGTCACGCTTCTCTATGTCCGCCGAATGGATGCCCGGCCAGCCAAGACCTTCATACCTGGATGGTTCTGCTCCGGGAGATTTTGGGTTTGACCCACTTGGGTTGGGTGCAGTGCCTGAGAATTTGGAGAGGTTCAAAGAGTCTGAACTCATCCATTGCAGATGGGCCATGGTCGCTGTTCCTGGGATCTTGATTCCAGAGGCGCTGGGGTTAGGCAACTGGGTGAAGGCTCAAGAGTGGGCTGCTATTCCGGGAGGACAAGCCACCTATTTGGGGCAGCCAGTCCCTTGGGGGACATTACCTACAATTTTGGTCATTGAGTTTCTTGCTATTGCTTTCGCAGAGCACCAACGCAGCATGGAAAAAGACCCGGAGAAGAAGAAGTACCCTGGAGGTGCATTTGATCCCCTGGGCTTCTCTAAAGACCCTGCAAAGTTGAAGGAATACAAGATCAAAGAGGTTAAAAATGGTCGGCTAGCGCTGTTGGCATTTGTTGGGTTCTGTGTGCAGCAATCAGCATACCCAGGGACAGGACCATTGGAGAACTTGGCCACTCACTTGGCTGACCCATGGCACAACAACATTGGCGATATCATCATCCCAAGAGGGATCTAA 921 50.71 MKVEAKKEAEDEQDVDLRGSEIVFSFQNLRDSKETQTCQICIGSLWLTIFSQNGLRNFTSLKMASNTLMSCGIAAVAHPSVLSSSKSKFAATFALPSVFANASSRFSMSAEWMPGQPRPSYLDGSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMVAVPGILIPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFAEHQRSMEKDPEKKKYPGGAFDPLGFSKDPAKLKEYKIKEVKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRGI 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2472779 2474834 + BLOR13227 Blo04g00315 59343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00315 306 Pfam Chlorophyll A-B binding protein 119 273 IPR022796 -
Blo04g00315 306 Gene3D Chlorophyll a/b binding protein domain 113 299 - -
Blo04g00315 306 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 85 299 IPR001344 GO:0009765|GO:0016020
Blo04g00315 306 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 85 299 - -
Blo04g00315 306 SUPERFAMILY Chlorophyll a-b binding protein 101 301 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00315 Blo13g00725 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00315 Blo-Chr4:2472779 Blo04g00773 Blo-Chr4:7617799 2.24E-47 dispersed
Blo07g01143 Blo-Chr7:31283238 Blo04g00315 Blo-Chr4:2472779 4.39E-44 transposed
Blo11g00311 Blo-Chr11:2502326 Blo04g00315 Blo-Chr4:2472779 1.50E-34 transposed
Blo13g00725 Blo-Chr13:30084886 Blo04g00315 Blo-Chr4:2472779 1.52E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00315 K08907 - csv:101211428 459.914