Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00321 ATGGAGCACTCGAGCGGAGAACATGGCGGAGAAGAGCTGACAAGCCTCTGCAAAGGTGCAGACCCATTGAACTGGGGATCGCTGGCGGAGGGCCTGAGAGGGAGCCATTTGGAGGAGGTGAAGCGGATGGTGGACGATTATCGGAAGGTGGTGGTTCGGCTGGGCGGTGAAACTCTGACGATAGGTCAAGTTGCCGCCATTGCCTCAGCAGATCACGGGGCAGTGACAGTGGAGCTGTCGGAGGCAACAAGGGAGAGAGTGAAGGCTAGCAGTGATTGGGTCCTTGAGAGTATGAACAAGGGGACTGATAGCTATGGAGTTACGACTGGTTTTGGTGCAACCTCCCATAGACGGACCAAGGAAGGTGGCGCTCTCCAAAATGAGCTAATCAGGTTTTTGAATGCTGGAATATTTGGAAATGGAAAAGACACAAGTCATACATTACCGCAGTCGGTGAGCAGAGCAGCCATGCTGGTGAGGATAAACACCCTTTTGCAGGGATACTCGGGAATCAGATTTGAGATCCTGGAAGCCATTGCTAAGCTCCTCAATCACAACATTACGCCCTGCCTTCCTCTCAGAGGAACAATCACCGCTTCTGGAGATTTAGTCCCTCTCTCTTACATTGCAGGGCTGTTAACTGGGAGGCTGAATTCAAAGGCTGTTGGTCCGAAAGGGGAGTCTCTTAATGCTTCTGAAGCCTTTCAACTGGCCGGCATAGGTGGAGGGTTTTTTGAGCTGCAGCCTAAAGAGGGTCTTGCTCTGGTTAATGGCACTGCCGTCGGGTCTGGTTTAGCTTCTTCCGTTCTTTTCGAGACCAACATTCTCGCACTTCTTGCCGAGATTTTATCGGCACTTTTCGCTGAAGTTATGCAAGGAAAGCCGGAGTTTACGGACCATTTGACTCATAGATTGAAGCATCACCCTGGCCAGATTGAAGCTGCAGCCATAATGGAGCACATTTTAGATGGAAGCTCTTACGTCAAATCCGCTCAAAAACTTCATGCGATGGACCCCCTGCAAAAGCCAAAGCAGGATAGATATGCTCTAAGAACATCTCCCCAGTGGCTCGGACCTCAAATTGAAGTCATCCGGGTCGCCACCAAGATGATCGAACAGGAAATAAACTCTGTAAATGACAACCCATTAATTGATGTTTCGAGAAACAAGGCTTTGCATGGGGGCAATTTCCAAGGTACCCCAATTGGTGTCTCGATGGATAATACTCGCCTAGCCATTGCTTCTATTGGAAAGCTCATGTTTGCTCAATTTTCCGAGCTAGTCAATGATGTTTACAACAATGGCTTGCCTTCAAATCTCTCAGCCAGTCGTAATCCGAGCTTGGATTACTCGTTCAAAGGTCCCGAAATAGCCATGGCGTCTTACTGCTCAGAGCTTCAGTTCTTGGCCAATCCAGTCACGAATCACGTGCAAAGTGCAGAGCAACACAACCAAGACGTGAACTCTCTGGGATTAATTTCTGCAAGAAAAACAGCCGAAGCAGTAGATATATTGAAGCTCATGTCCTCAACTTTCTTAGTGGCATTGTGTCAAGCAGTTGATCTGCGTCATTTAGAGGAAATCCTAAAGAACGCAGTGAAGAACACAGTGGGCCAAGTATCAAAGAAGATCTTAGTCATGGAATTAAATGGAGGACTCCACCCGATCAGATTCAGCGAAAAAGATTTACTCAAAGTGGTCGACAGAGAGCATGTTTTCTCTTACATCGACGACCCATGCAGCAACACATACCCATTGATTCAAAATTTGAGACAAGTTCTGGTAGACCACGCGCTCAGCAATGGCGACAGAGAAAGAAATCCAAGCACGTCCATTTTCCAGAAAATCGGAGCTTTCGAGGCAGAACTGAAAACCCTATTGCCTACAGAAGTGGAAAACGCGAGGAAAGCGTACGAAAATGGAAACCCGGCAATTCAAAACCAGATTAAGGCGTGCAGATCATACCCATTATACAAGTGGGCGAGAGAGACATTGGGGACAAAACTTCTGACAGGAGAGGAAGTTAGATCTCCGGGTGAAGAATTTGAGAAAGTATTCTCTGCAATCTGTGATGGGAAACTGATTGATCCAATGCTCGAGTGTTTGAAAGACTGGAATGGCGCTCCTCTTCCTATTTGCTAA 2142 47.57 MEHSSGEHGGEELTSLCKGADPLNWGSLAEGLRGSHLEEVKRMVDDYRKVVVRLGGETLTIGQVAAIASADHGAVTVELSEATRERVKASSDWVLESMNKGTDSYGVTTGFGATSHRRTKEGGALQNELIRFLNAGIFGNGKDTSHTLPQSVSRAAMLVRINTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRLNSKAVGPKGESLNASEAFQLAGIGGGFFELQPKEGLALVNGTAVGSGLASSVLFETNILALLAEILSALFAEVMQGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSSYVKSAQKLHAMDPLQKPKQDRYALRTSPQWLGPQIEVIRVATKMIEQEINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDVYNNGLPSNLSASRNPSLDYSFKGPEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTFLVALCQAVDLRHLEEILKNAVKNTVGQVSKKILVMELNGGLHPIRFSEKDLLKVVDREHVFSYIDDPCSNTYPLIQNLRQVLVDHALSNGDRERNPSTSIFQKIGAFEAELKTLLPTEVENARKAYENGNPAIQNQIKACRSYPLYKWARETLGTKLLTGEEVRSPGEEFEKVFSAICDGKLIDPMLECLKDWNGAPLPIC 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2562592 2565645 + BLOR13233 Blo04g00321 59349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00321 713 Pfam Aromatic amino acid lyase 59 532 IPR001106 -
Blo04g00321 713 Gene3D - 14 259 IPR024083 -
Blo04g00321 713 PANTHER HISTIDINE AMMONIA-LYASE 17 713 IPR001106 -
Blo04g00321 713 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 17 713 - -
Blo04g00321 713 Gene3D - 526 647 IPR023144 -
Blo04g00321 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841
Blo04g00321 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Blo04g00321 713 CDD PAL-HAL 57 523 IPR001106 -
Blo04g00321 713 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 21 703 IPR005922 GO:0005737|GO:0006559|GO:0016841
Blo04g00321 713 SUPERFAMILY L-aspartase-like 21 713 IPR008948 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01172 Blo-Chr1:43104660 Blo04g00321 Blo-Chr4:2562592 0 dispersed
Blo12g00472 Blo-Chr12:22294829 Blo04g00321 Blo-Chr4:2562592 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00321 K10775 - pop:7479878 1166.76