Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00349 ATGCTGCAGAGTATGCGACTGATGCAGGTTGTAATGAATAATAATGACTTGCATAGACGTTTTGTGCTTAAGGCAATATCTGGTTCAACTTCAAGTGCCGACACAAGTGGCACTGAAGAAAAGGAGGAAAAATCTGATGTTTATAGCAACAACATGACAGAAGCTATGGGGGCTGTTTTAACCTACAGACACGAACTGGGAATGAACTACAATTTCATTCTTCCAGATCTCATTGTGGGGTCATGTCTTCAGACTCCACAAGATGTCGATAAGCTTCGACAAATAGGAGTGAAAACAATATTTTGCCTGCAGCAAGATCCAGATTTGGAATATTTTGGGGTTGATATTAGTGCCATAAGAGAGAATGCAAAGACATTCGATGACATTGAGCATTTGCGTGTTGAGATAAGGGATTTTGATGCGTATGATTTGCGCTTGAGACTGCCATCTGTTATTAGCAAATTACTCGAGGCCATAAACAGGAATGGAGGCGTCACTTATATACATTGCACAGCTGGGCTTGGGAGAGCTCCTGCTGTTGCGTTGGCATATATGTTCTGGGTTCAAGGCGACAAACTTAGCGAAGCTCACGAATTGTTGCTGAGCAAGCGCTTCTGCTTCCCAAAACTAGATGCCATAAAAAGTGCAACTGCTGATATTCTTTCAAGCTTCAGGAAGAAACTTGTGACTTTAAAATGGGAAGATTGCAAGTGCTCAACTGTGGAAATTTCTGGTCTTGATATTGGTTGGGGCCAGAGAGTGCCTTTAAAATTAGACAACGAACAGGGTTTGTGGATTCTCAATAGGGAATTACCGGAAGGACAATATGAATACAAGTACATTGTGGATGGCGAATGGATGTGTAATGAATATGAGCCAGTTACTACTCCCAACAAAGATGGCCACGTCAACAACTTTATTCAAGTCCTAGACGACAATCCGAATAGCGAAAGCACAAGCCTGCGGAAGAGGCTCAGTGGCGATGATCCCGAGCTCACGACCGAGGAAATATGGAAAATAAGGCAATATCTTGAGGCTTATGCGGATGGAAAGTGA 1056 42.71 MLQSMRLMQVVMNNNDLHRRFVLKAISGSTSSADTSGTEEKEEKSDVYSNNMTEAMGAVLTYRHELGMNYNFILPDLIVGSCLQTPQDVDKLRQIGVKTIFCLQQDPDLEYFGVDISAIRENAKTFDDIEHLRVEIRDFDAYDLRLRLPSVISKLLEAINRNGGVTYIHCTAGLGRAPAVALAYMFWVQGDKLSEAHELLLSKRFCFPKLDAIKSATADILSSFRKKLVTLKWEDCKCSTVEISGLDIGWGQRVPLKLDNEQGLWILNRELPEGQYEYKYIVDGEWMCNEYEPVTTPNKDGHVNNFIQVLDDNPNSESTSLRKRLSGDDPELTTEEIWKIRQYLEAYADGK 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2735410 2740831 - BLOR13261 Blo04g00349 59377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00349 351 CDD DSP_laforin-like 68 215 IPR045204 GO:0019203|GO:0046838
Blo04g00349 351 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 6 349 - -
Blo04g00349 351 Gene3D Protein tyrosine phosphatase superfamily 62 343 IPR029021 -
Blo04g00349 351 Gene3D Immunoglobulins 224 315 IPR013783 -
Blo04g00349 351 PANTHER PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC 6 349 IPR030079 GO:0005982|GO:0007623|GO:0019203
Blo04g00349 351 SUPERFAMILY E set domains 228 310 IPR014756 -
Blo04g00349 351 CDD E_set_AMPKbeta_like_N 229 309 - -
Blo04g00349 351 Pfam Glycogen recognition site of AMP-activated protein kinase 229 312 IPR032640 -
Blo04g00349 351 Pfam Dual specificity phosphatase, catalytic domain 116 207 IPR000340 GO:0008138|GO:0016311
Blo04g00349 351 SMART dsp_5 69 227 IPR020422 GO:0006470|GO:0008138
Blo04g00349 351 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 146 204 IPR000387 GO:0016311|GO:0016791
Blo04g00349 351 ProSiteProfiles Dual specificity protein phosphatase domain profile. 69 226 IPR020422 GO:0006470|GO:0008138
Blo04g00349 351 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 66 211 IPR029021 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00349 Blo13g00691 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00533 Blo-Chr1:5871123 Blo04g00349 Blo-Chr4:2735410 3.68E-06 transposed
Blo04g00191 Blo-Chr4:1531814 Blo04g00349 Blo-Chr4:2735410 5.33E-44 transposed
Blo18g00335 Blo-Chr18:3476759 Blo04g00349 Blo-Chr4:2735410 4.24E-35 transposed
Blo13g00691 Blo-Chr13:29671812 Blo04g00349 Blo-Chr4:2735410 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00349 - - zju:107413253 555.058