Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00353 AGTGGGCACTCTGCCGTTTATATTGGCAAATCGAAGGTCGTCTTCTTTGGTGGCCTTGTCGACAAACAATTTCTCAGCGATATAGCTGTCTACGATACTGAAAACAAATTATGGTTTCGGCCAGAATGCACAGGCAGTGGCTCTAATGGACAAGTGGGTCCTAATGCGCGAGCATTTCACATTGCTGTTGCAATTGATTGCCATATGTTCATTTTTGGTGGGCGCTATGGTAGTCAAAGGTTAGGAGACTTCTGGGTCCTAGACACTGATATATGGCAATGGTCAGAGCTGACCAGTTTTGGTGACTTACCGTCACCACGAGACTTTGCAGCAGCTTCATCTATCGGAAACCGGAAAATTGTCATGTATGGTGGTTGGGATGGTAAAAAGTGGCTGTCAGATGTCTATGTCCTGGACACAATGTCACTTGAATGGACAGAACTTGCAGTTTCTGGTTCATTGCCTCCACCAAGATGCGGCCATACAGCTACCATGGTTGAGAAACGGATGCTTATCTATGGTGGCAGAGGAGGTGGCGGGCCTATCATGTCTGACTTATGGGCCTTGAAGGGACTTATTGAAGAAGAGAATGAAACCCCAGGATGGACCCAGTTAAAGCTTCCAGGTCAAGCTCCGTCGCCTCGTTGTGGACATACAGTTACATCTGGAGGACATTATCTATTGCTATTTGGAGGGCATGGTACTGGTGGTTGGCTTAGTCGCTATGACATTTATTACAATGATTGCATTGTCTTGGACAGATTGTCGGCTCAATGGAAGCGCTTACCTATTGGAAATGAACCGCCTCCTGCTCGAGCATACCATTCTCTTACTTGTATTGGATCAAATTATTTGTTGTTTGGTGGATTTGATGGGAAATTGACCTATGGTGACTTATGGTGGTTGGTTCCAGAAGAGGACCCTATGGTAAAGAAGTTGGCTGCATCTTCTCCAAACAATGTTCAAGAAAATAAGGATGTGGTATCAGAAACTCCCAGTGTCCAATATGGACTAAAGGACATGCACAGTAAAACATCTGCACTCTCAGAATTGCAATCAAAATTTGGGATTTCAGTTTCACTCACTGGTTCAGGTTCTCCAGGTTTAGACGTGACAGCAGACAGAGCATTTCTCGACCTAGCATTTAGCTTGACCAAGGAAAGAGTTTCTACCAATGAACTAAATTCACAAAGTCAGATGTTCCTTTACCAAATTCTTCGTGGCATTGCTTATTGTCATTCTCACAGAGTACTCCATAGGGATCTGAAACCTCAAAATTTGCTGATAGACCGCCGTACTAACGCGCTAAAGCTTGCTGATTTTGGACTGGCCAGAGCATTTGGCATTCCTGTTAGGACATTTACACATGAGGTGGTGACGCTTTGGTACAGAGCTCCAGAAATATTGCTTGGATCCCGTCACTACTCCACCCCGGTCGATGTGTGGTCTGTGGGTTGTATATTTGCGGAGATGCTAAACCTACGGCCATTATTCCCTGGGGACTCAGAGATTGATGAATTGTTTAAGATATTCAGAGTCCTGGGCACTCCAAATGAGGATACTTGGCCTGGAGTTACTTCTTTGCCTGATTTTAAGTCAGCCTTCCCCAAGTGGCCTTCAAAGGACATGGCTTCTGTAGTTCCAAGTCTTGAAGCAACTGGTGTTGATCTTCTTTCTAAAATGCTCTGCTTGGATCCCAGTAAGCGAGTTACAGCCAGGAGTGCTCTCGAGCATGAATACTTTAAGGACGTCGGATTAGTACCCTGA 1767 45.1 SGHSAVYIGKSKVVFFGGLVDKQFLSDIAVYDTENKLWFRPECTGSGSNGQVGPNARAFHIAVAIDCHMFIFGGRYGSQRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASSIGNRKIVMYGGWDGKKWLSDVYVLDTMSLEWTELAVSGSLPPPRCGHTATMVEKRMLIYGGRGGGGPIMSDLWALKGLIEEENETPGWTQLKLPGQAPSPRCGHTVTSGGHYLLLFGGHGTGGWLSRYDIYYNDCIVLDRLSAQWKRLPIGNEPPPARAYHSLTCIGSNYLLFGGFDGKLTYGDLWWLVPEEDPMVKKLAASSPNNVQENKDVVSETPSVQYGLKDMHSKTSALSELQSKFGISVSLTGSGSPGLDVTADRAFLDLAFSLTKERVSTNELNSQSQMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMLNLRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPSKDMASVVPSLEATGVDLLSKMLCLDPSKRVTARSALEHEYFKDVGLVP 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2800239 2814294 + BLOR13265 Blo04g00353 59381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00353 588 PANTHER CYCLIN-DEPENDENT KINASE A-2 394 586 - -
Blo04g00353 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Blo04g00353 588 Gene3D - 194 321 IPR015915 GO:0005515
Blo04g00353 588 SUPERFAMILY Kelch motif 54 307 IPR015915 GO:0005515
Blo04g00353 588 Pfam Galactose oxidase, central domain 168 221 - -
Blo04g00353 588 Pfam Galactose oxidase, central domain 67 115 - -
Blo04g00353 588 Pfam Galactose oxidase, central domain 117 164 - -
Blo04g00353 588 Pfam Galactose oxidase, central domain 224 278 - -
Blo04g00353 588 Gene3D - 1 193 IPR015915 GO:0005515
Blo04g00353 588 SUPERFAMILY Protein kinase-like (PK-like) 397 584 IPR011009 -
Blo04g00353 588 SUPERFAMILY Kelch motif 2 40 IPR015915 GO:0005515
Blo04g00353 588 SMART serkin_6 307 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00353 588 PANTHER CELL DIVISION PROTEIN KINASE 394 586 - -
Blo04g00353 588 Pfam Galactose oxidase, central domain 2 38 - -
Blo04g00353 588 Pfam Protein kinase domain 396 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00353 588 ProSiteProfiles Protein kinase domain profile. 285 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00353 588 Gene3D Transferase(Phosphotransferase) domain 1 395 582 - -
Blo04g00353 588 SMART kelc_smart 119 168 IPR006652 GO:0005515
Blo04g00353 588 SMART kelc_smart 68 117 IPR006652 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00353 Blo-Chr4:2800239 Blo01g00370 Blo-Chr1:4310938 2.15E-55 dispersed
Blo17g00666 Blo-Chr17:16786129 Blo04g00353 Blo-Chr4:2800239 1.05E-14 dispersed
Blo14g00502 Blo-Chr14:6782258 Blo04g00353 Blo-Chr4:2800239 3.72E-07 transposed
Blo13g00685 Blo-Chr13:29587981 Blo04g00353 Blo-Chr4:2800239 5.34E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84226 PF00069 Pkinase 3.40E-50 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00353 - - qsu:111988641 644.81