Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00388 ATGGCTGATGGAAGTCCCAGGACTGATATATCTACCGATGTGGAAACAGACGACAAAAATCTGATGGGCGTTAGAGGTCAACCTAATGCTGGTGCAGCATTTGATTCTAGCGACAGGTCAAATGACAAAAGTGATCAGAAGACTCTTCGTAGGCTTGCACAAAATCGTGAGGCGGCTAGAAAAAGTCGACTGAGGAAAAAAGCATATGTTCAACAGTTGGAGACCAGTCGTTTGAAGCTCACCCAACTCGAGCAGGAGCTTCAGCGTGCTAGACAACAGGGAATATTCATATCAGGTTCAGGAGATCAAGCCCATTCTATGAGTGGAAATGGTATTCTTGCGACCTTCAAGCATTTCTGTTTCATTAATGGACATTTATGCTTACGAGATGGAGCACTTTTGACAGGAGCCATGGCTTTTGATGTGGAATATGGGCGGTGGCTTGAAGAACATATTCGACAAATTAATGAACTGAGATCTGCAGTCAATTCTCACGCAAGCGAAACAGAACTTCGAATCATCGTTGATGGTGTAATGGCGCATTATGAAGAGATTTTCAAGCTGAAGGGCACTGCAGCAAAGGCTGATGTTTTCCATTTATTGTCTGGCATGTGGAAAACACCCGCCGAAAGGTGTTTCCTGTGGTTGGGCGGTTTCCGGTCATCTGAGCTTCTTAAGCTTCTTGTGAATCAATTGGAGCCTCTGACGGAGCATCAAATGGCAAACATTAACAACTTGCAGCAGTCCTCGCAGCAGGCTGAAGACGCACTATCACAAGGCATGGATGCATTGCAACAGTCCCTATCAGAGACATTGTCCAGTGGCTCTCTTGGCTCCTCAGGATCATCTGGCAATGTGGCCAACTACATGGGTCAAATGGCTATGGCCATGGGTAAACTAGGCACTCTCGAGGGATTTATTCGCCAGGTTTTACTAATATTTCGTAACTCTCGACGAATTTGTTTTTTGATTGAAGCTGATAATTTGCGGCTACAAACACTCCAACAAATGCATCGGATATTGACGACTCGCCAGTCTGCTCGAGCACTTCTTGCAATACACGATTACTTCTCCAGATTACGTGCTCTTAGTTCCCTCTGGCTGGCCAGGCCTCGAGAGTAG 1122 45.81 MADGSPRTDISTDVETDDKNLMGVRGQPNAGAAFDSSDRSNDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLETSRLKLTQLEQELQRARQQGIFISGSGDQAHSMSGNGILATFKHFCFINGHLCLRDGALLTGAMAFDVEYGRWLEEHIRQINELRSAVNSHASETELRIIVDGVMAHYEEIFKLKGTAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEHQMANINNLQQSSQQAEDALSQGMDALQQSLSETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQVLLIFRNSRRICFLIEADNLRLQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3123559 3126105 - BLOR13300 Blo04g00388 59416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00388 373 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Blo04g00388 373 Pfam bZIP transcription factor 47 87 IPR004827 GO:0003700|GO:0006355
Blo04g00388 373 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Blo04g00388 373 PANTHER TRANSCRIPTION FACTOR TGA9 1 114 - -
Blo04g00388 373 CDD bZIP_HBP1b-like 47 99 - -
Blo04g00388 373 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 1 114 - -
Blo04g00388 373 Gene3D - 46 95 - -
Blo04g00388 373 ProSiteProfiles DOG1 domain profile. 137 370 IPR025422 GO:0006351|GO:0043565
Blo04g00388 373 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Blo04g00388 373 Coils Coil 148 168 - -
Blo04g00388 373 Coils Coil 66 93 - -
Blo04g00388 373 PANTHER TRANSCRIPTION FACTOR TGA9 136 373 - -
Blo04g00388 373 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
Blo04g00388 373 MobiDBLite consensus disorder prediction 1 49 - -
Blo04g00388 373 Pfam Seed dormancy control 154 229 IPR025422 GO:0006351|GO:0043565
Blo04g00388 373 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 136 373 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00388 Blo09g00369 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00492 Blo-Chr1:5415350 Blo04g00388 Blo-Chr4:3123559 8.89E-137 dispersed
Blo04g00388 Blo-Chr4:3123559 Blo07g01222 Blo-Chr7:32190819 1.91E-125 dispersed
Blo11g00051 Blo-Chr11:410168 Blo04g00388 Blo-Chr4:3123559 7.87E-69 dispersed
Blo04g00388 Blo-Chr4:3123559 Blo09g00369 Blo-Chr9:14405255 1.30E-131 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12242 PF14144 DOG1 1.50E-32 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00388 K14431 - qsu:112028986 511.916