Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g00402 | ATGGAGACCCGGCAACCAACTTCTGATCGTAATGGTGTCTCAGGTGTCATAACTTTTTCCCCCGAAATAATATTGATTTTTTCGAATTACTGTAAAGTTTTATCAGTGAAGCTAGATGAGTGGAGTGATGAACAAGTTGATTCAATGATAAATAAGGGTGGTAATACTACAGTAAACAAGAAGTATGAAGCTTGCATCCCAGATAGCCAGAAAAAACCAAAACCGGAATCAAGTATAGAAGAACGATGTGATTTTATTAGAAACAAATATGAGCTGCTAAAATTTTTGAGCCAGGAAGATCAACCAAAGTCTCACAAAAGGAATTCATCTTCTTCCCAAGTTTCTGTAAGCAATAGTTCTACACAAGAGAAGAAACAATATGAAAAGCAAGCAACGAAACATCGCATTGGGAATGCATTTAGAAACAGCTGGGGAAGGAAAGATTCTGAGTACAAGATATCTAAGAAGACCAACTCCTTGGTAGCAAGTAATTCAATGGCAGGAATGGTTGAATTTGTTGGCTTGATCAAGGTCAATGTAGTGAGAGGCACCAATCTAGCAGTCAGAGACGTGATTACAAGCGACCCTTATGTGATTCTCACATTGGGCCATCAATCCGTGAAGACGCGAGTGATCAAGAGTAATCTCAATCCAGTCTGGAACGAGAGCCTAATGCTTTCAATTCCAGAGCACATTCCTCCTCTAAAAATTCTTGTTTACGACAAGGACACGTTTTCAACTGATGACTTCATGGGGGAGGCAGAAATCGACATTCAGCCACTTCTAACAGCAGCCAAGGCGTGCGAAACTTCTACAATCCACGAGTCGATTCAGCTCGGGAAGTGGATTGCGAGCAAAGATAACACCCTTGTAAAAGATGGAGTAATCAACCTTATAGATGGAAGGGTGAGACAGGACATCTCCCTCCGTCTAGAAAACGTCGAGAGGGGCGTGCTAGAGATGGAGCTCGAATGCGTTCCTCTCTCTCAATAG | 993 | 41.79 | METRQPTSDRNGVSGVITFSPEIILIFSNYCKVLSVKLDEWSDEQVDSMINKGGNTTVNKKYEACIPDSQKKPKPESSIEERCDFIRNKYELLKFLSQEDQPKSHKRNSSSSQVSVSNSSTQEKKQYEKQATKHRIGNAFRNSWGRKDSEYKISKKTNSLVASNSMAGMVEFVGLIKVNVVRGTNLAVRDVITSDPYVILTLGHQSVKTRVIKSNLNPVWNESLMLSIPEHIPPLKILVYDKDTFSTDDFMGEAEIDIQPLLTAAKACETSTIHESIQLGKWIASKDNTLVKDGVINLIDGRVRQDISLRLENVERGVLEMELECVPLSQ | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3293491 | 3297075 | + | BLOR13314 | Blo04g00402 | 59430 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g00402 | 330 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 29 | 330 | IPR044518 | GO:0005096|GO:0005543 | |
Blo04g00402 | 330 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 171 | 268 | IPR035892 | - | |
Blo04g00402 | 330 | MobiDBLite | consensus disorder prediction | 107 | 125 | - | - | |
Blo04g00402 | 330 | PANTHER | CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN | 29 | 330 | - | - | |
Blo04g00402 | 330 | CDD | C2_ArfGAP | 173 | 317 | - | - | |
Blo04g00402 | 330 | Gene3D | C2 domain | 173 | 327 | IPR035892 | - | |
Blo04g00402 | 330 | ProSiteProfiles | C2 domain profile. | 156 | 271 | IPR000008 | - | |
Blo04g00402 | 330 | Gene3D | Arf GTPase activating protein | 25 | 105 | IPR038508 | - | |
Blo04g00402 | 330 | Pfam | Putative GTPase activating protein for Arf | 30 | 97 | IPR001164 | GO:0005096 | |
Blo04g00402 | 330 | Pfam | C2 domain | 175 | 267 | IPR000008 | - | |
Blo04g00402 | 330 | SMART | C2_3c | 175 | 270 | IPR000008 | - | |
Blo04g00402 | 330 | MobiDBLite | consensus disorder prediction | 98 | 132 | - | - | |
Blo04g00402 | 330 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 30 | 96 | IPR037278 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00402 | Blo-Chr4:3293491 | Blo08g00256 | Blo-Chr8:3265436 | 7.17E-92 | dispersed | |
Blo13g00639 | Blo-Chr13:28948742 | Blo04g00402 | Blo-Chr4:3293491 | 3.47E-171 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g00402 | K12486 | - | csv:101221541 | 462.225 |