Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00426 ATGTCTAATTCGGAAGGTGGTAATAACGGCGTCGTCAACGGCGCTTTAATTGACCCTCAGAGACAACAGCAGCAGCCAAATGGAGCGCTTGTTGTCAAAAAGCCGCCCTCCAAAGACCGACACAGTAAGGTCGACGGTCGAGGTCGCCGTATTCGGATGCCGATCATTTGCGCCGCTCGTGTGTTTCAGCTTACTAGAGAGCTTGGACACAAGTCCGATGGTCAGACCATCGAGTGGCTTCTACGGCAAGCTGAGCCTTCGATCATAGCTGCAACGGGAACTGGTACTACTCCCGCCAGCTTCTCTTCCGTCTCCGTATCCGTCAGAGGCGGCGGCGTCGGTTCGAGTTCGCTCTCTTCCTCTTCCACTTCGTCCTCTCTATCCCTTTCTCGGCCCCAGGCCTTCTCCGGACCCACCCCCTTTATTCTTGGTAAACGTGTAAGAACCGACGACGACGGAGGAGCTGGAGCTAAGGACGAAGTCGTATCCGTTGGTCCCACAGTGGGCTCCATAGTGGGTCCCTCCGCCGCCGGTGGATACTGGGCCATTCCGGCCAGGCAGGACTTTGGGCAGATTTGGAGCTTTGCTACGGGGACGGCAGGTCCGGAATTGATTCACCCTTCCGCGGTCACTCAGCAGGGTTCGCTATTTGTTCAGCAGCAGCAGACGATTGGAGAGGCTTCGGCGGCACGGGTGGGGAATTATCTTCCGGGACATTTGAATTTACTGGCTTCGTTATCAGGTGGAACCGGCAATTCAGGTCGGAGAGAAGATGACCAA 780 56.15 MSNSEGGNNGVVNGALIDPQRQQQQPNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGGVGSSSLSSSSTSSSLSLSRPQAFSGPTPFILGKRVRTDDDGGAGAKDEVVSVGPTVGSIVGPSAAGGYWAIPARQDFGQIWSFATGTAGPELIHPSAVTQQGSLFVQQQQTIGEASAARVGNYLPGHLNLLASLSGGTGNSGRREDDQ 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3495247 3496026 + BLOR13338 Blo04g00426 59454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00426 260 MobiDBLite consensus disorder prediction 34 49 - -
Blo04g00426 260 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 258 IPR005333 GO:0003700
Blo04g00426 260 MobiDBLite consensus disorder prediction 1 30 - -
Blo04g00426 260 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 258 - -
Blo04g00426 260 MobiDBLite consensus disorder prediction 112 132 - -
Blo04g00426 260 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Blo04g00426 260 MobiDBLite consensus disorder prediction 1 49 - -
Blo04g00426 260 Pfam TCP family transcription factor 37 121 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00426 Blo-Chr4:3495247 Blo16g01121 Blo-Chr16:39702350 5.03E-37 dispersed
Blo04g00426 Blo-Chr4:3495247 Blo04g00768 Blo-Chr4:7327486 7.95E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12250 PF03634 TCP 2.10E-32 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00426 K16221 - csv:101206050 331.643