Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00428 ATGAGGGTATCAACTTCTACTCGGTTGGAGGGGTTTGATGATATGAGATTGGAAAGCAGGGAAGCCATTGTTCCTGAATATGCTTTTTCAAGGGACGACAGTAAGGGAGTGGAGGATAGTATTTATCCGGTCAATGAGGACTCTCCATATGTTAAGAATATCATGACAGTTGAAAACAGACCGTCTATAGGCAGTGAAGATAGTAATATTATGGGTTTGCCTCTGTCTTCAATCACTGCTTTACATAGTAAAAGAAGGTGGGATGACACATCATTTTACAAGGGAAAGAAGATGCATCAGTCTTGGTTTCAACTACCAAATGGAAATTGGGAGCTGACAAAAATATTATCATCTACAGGAACTGAATCTGTTATTTCACTGTCTGATGGGAGAGTTTTAAAGATTAAATCTGAAAGTTTGATAGCTGGGAATCCTGATATCCTTCTCGGAGTGGACGATCTAATGCAACTAAGCTATTTAAATGAGCCATCAGTTTTGTATAATCTTCAATACAGATACAATCAAGACATTATCTATACAAAAGCTGGTCCTGTTTTGGTTGCAATTAACCCCTTCAAGAAAGTCTTTTTATATGGAGATAATTTTGTCAAAGCATATAAGCAAAAATTGGTCGAAACTCCACACGTATATGCCATTACTGATACAGCCATTCGGGAAATGATTCGAGATGAAGTGAATCAATCTATTATTATAAGTGGAGAAAGTGGAGCTGGAAAGACTGAAACAGCAAAAATAGTAATGCAATATTTGGCTGCTCTTGGGGGTGGAAGTGGAATAGAATATGAAATATTGAAGACAAATCCAATCTTAGAAGCTTTTGGAAATGCAAAAACATTGAGAAATGACAACTCAAGTCGCTTTGGAAAATTGATTGAAATCCATTTTAGTGAAACAGGAAAAATATCGGGTGCTAATATTAAAACATTTTTGCTTGAAAAGGTAATTCCATTTCTCCAATCTGATTGTTGTCTATTTAAAGTGGCAAGATCGCTAATGTTTTATCAGAAATCAACTTTCTTATTCAAATATGTTTTTGGACAGTCTAGAGTGGTTCAATGCATGGAGGAGGAGAGGTCCTATCATATTTTTTACCACCTTTGTAATGGGGCGCCAACTTCTCTTAGAGCAGAGATGCTGAATTTGAAGAGTGCCGATGAGTATAAATATTTGAAACTGAGCAATTGCTATTCAATAACTGGGGTTGATGATAGGGAACAATTTCATGTTGTTGTGGAAGCATTAGATGTGGTCCATATAAACAAACAAGACCAGCAAAGTACATTTGCAATGCTTGCTGCAGTGCTTTGGCTGGGAAATATTTCCTTTACTGTTATAGACAATGAGAGTCATGTAGAGGCGGTTCATGATGAAGCTCTATCTACTGTTGTTAAACTTCTTGGATGCAAGATAGAAGACCTTAAGGTAGCTTTATCAACTCGAAAAATGAGCGTTGGCAATGATGAGATTGTTCAAAAGCTTACATTTTCACAGGCAAGTGACGCCAGAGATGCTTTGGCAAAGTCAATTTATGCTTGTCTTTTTGAATGGCTGGTAGAACAAATTAACAAATCTCTTGCTGTAGGCAAACGCCGCACTGGAAGATCCATTAGCATTCTTGACATTTACGGCTTTGAATCATTTGACAAGAATAGTTTTGAACAGTTCTGCATAAATTATGCAAATGAAAGATTGCAGCAACACTTTAATCGCCATCTATTCAAGCTAGAGCAGGAGGAATACATTCAAGATGGCATTGACTGGACAAAAGTTGAGTTTGAAGACAATCAAGACTGTCTGAGTCTTTACGAAAAGAGACCCTTGGGGTTGTTGTCTCTGTTGGATGAGGAGGCTACATTTCCAAATGGCACTGATTTGACTTTCGCCAACAAGCTCAAGCAACACCTTAATTCGAAAGCTTGTTTCAGAGGAGAACGAGACAAGGCCTTTACTGTCTCTCACTATGCAGGAGAGGTTACATATGACACGACTGGCTTTTTGGAGAAGAACAGGGACTCATTGCTCCTGGATTCTATTCAACTCCTATCCTCGTGTTCTTGCCAACTTCCTCAACTATTTGCATTCAAGATGCTAAATCAATGTGACAAGCCTGTAGCTGGCCCTTTACATAAATCAGGCGGTGCAGAATCGCAGAAACAAAGTGTTGCAACAAAATTTAAGGGTCAATTGTTTCAATTGATGCAACGTCTAGAGAATACTACCCCACATTTCATTCGTTGCATCAAGCCTAATAATTTTCAACGCCCTGGATTGTATGAACAAAGATTAGTACTAGAACAGTTGAGATGTTGCGGGGTCCTAGAAGTGGTCAGAATATCCAGATCAGGATTTCCTACCAGAATGTACGGTTTTCTTCTCCTGAAAAGTGCTGTCTCTCATGATCCGCTTAGTGTCTCAGTTGCGATTCTGCAGCAGTTCAAGATATTACCAGACATGTACCAAGTCGGCTACACAAAATTGTTTTTCCGAACTGGACAGATTGGGGTGCTCGAGGATACAAGAAGCCGTACCCTCCACAGCATTTTACTTGTTCAAAGCTGCTTCAAAGGGCACCAAGCTCGTCGACGATACCAGGAGCTGAGGAGAGGAGTTCTCACTCTTCAGTCATTTGTACGTGGACAAAAAACCAGAAAGGAAATTGCCTGCTTACTCCGGAGACACAGAGCTGCCATTTCCATTCAAAAGTGGACGAAAGCAAAGATCACTCGAAAAGAATTGAACAATATTCGTTGTGCGTCGTTAAAGATACAATCTGTTATTCGTGGCTTTATGGTTCGACGATGCGCCGGCGAAGATGCTGGACTACTAGTACAACCTGAGAGCCAAAAGACGGACGAGGTCCGGGTGAAGTCACATTTTCTAGCAGAATTACATCGACGTGTTTTCAAAGCAGAGGCTGCTTTGAGAGAAAAAGAAGAGGGAAGTGAAATCCTCCATCAACGCCTTCAACAATACGAAAGCCGTTGGCTGGAGTACGAGCTGAAAATGAGGTCGATGGAAGAGATGTGGCAGAAACAAATGAGGTGCTTACAATCGAGGCTCTCCAATGCAAAGAAGAGCATGGGGACTGACGGTTCCGAGAGAAATTCCGATGCGTCAGTCAATGCTAGCGACGACAGGCATTTCAGCTGGGACGCGAGCGTAAACAGCGAAGTTCCAGAGATTCAGCCGGTGAGCGGAGGTTTGAGTGCTATAAGCCGGTTGGCTGAAGAATTGGAGCAGAGAAAGCAAGTGTTCGGAGACGATGCCAAGTTTCTGGTGGAGGTGAAATCCGGACAGGTGGAGGCGAGTTTGGATCCAGATAGAGAACTGATAAGGTTGAAGCGCATGTTTGAATCTTGGAAGAAAGATTACGGGGCGAGGCTGCGTGAGACGAGGCTGATTTTGAACAAACTAGGAAATGACGGAGCCGTCGATCGCGGAAGAAAGAAGTGGTGGGGAAGGAAGAACAGCTTGAGGTTTGATTCCTGA 3510 41.45 MRVSTSTRLEGFDDMRLESREAIVPEYAFSRDDSKGVEDSIYPVNEDSPYVKNIMTVENRPSIGSEDSNIMGLPLSSITALHSKRRWDDTSFYKGKKMHQSWFQLPNGNWELTKILSSTGTESVISLSDGRVLKIKSESLIAGNPDILLGVDDLMQLSYLNEPSVLYNLQYRYNQDIIYTKAGPVLVAINPFKKVFLYGDNFVKAYKQKLVETPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIVMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIKTFLLEKVIPFLQSDCCLFKVARSLMFYQKSTFLFKYVFGQSRVVQCMEEERSYHIFYHLCNGAPTSLRAEMLNLKSADEYKYLKLSNCYSITGVDDREQFHVVVEALDVVHINKQDQQSTFAMLAAVLWLGNISFTVIDNESHVEAVHDEALSTVVKLLGCKIEDLKVALSTRKMSVGNDEIVQKLTFSQASDARDALAKSIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTKVEFEDNQDCLSLYEKRPLGLLSLLDEEATFPNGTDLTFANKLKQHLNSKACFRGERDKAFTVSHYAGEVTYDTTGFLEKNRDSLLLDSIQLLSSCSCQLPQLFAFKMLNQCDKPVAGPLHKSGGAESQKQSVATKFKGQLFQLMQRLENTTPHFIRCIKPNNFQRPGLYEQRLVLEQLRCCGVLEVVRISRSGFPTRMYGFLLLKSAVSHDPLSVSVAILQQFKILPDMYQVGYTKLFFRTGQIGVLEDTRSRTLHSILLVQSCFKGHQARRRYQELRRGVLTLQSFVRGQKTRKEIACLLRRHRAAISIQKWTKAKITRKELNNIRCASLKIQSVIRGFMVRRCAGEDAGLLVQPESQKTDEVRVKSHFLAELHRRVFKAEAALREKEEGSEILHQRLQQYESRWLEYELKMRSMEEMWQKQMRCLQSRLSNAKKSMGTDGSERNSDASVNASDDRHFSWDASVNSEVPEIQPVSGGLSAISRLAEELEQRKQVFGDDAKFLVEVKSGQVEASLDPDRELIRLKRMFESWKKDYGARLRETRLILNKLGNDGAVDRGRKKWWGRKNSLRFDS 1169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3505954 3516148 + BLOR13340 Blo04g00428 59456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00428 1169 Gene3D - 785 846 - -
Blo04g00428 1169 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 350 1167 - -
Blo04g00428 1169 CDD MYSc_Myo8 163 836 IPR036022 -
Blo04g00428 1169 MobiDBLite consensus disorder prediction 1028 1050 - -
Blo04g00428 1169 Gene3D - 849 901 - -
Blo04g00428 1169 Gene3D - 902 944 - -
Blo04g00428 1169 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 896 IPR027417 -
Blo04g00428 1169 SMART MYSc_2a 143 849 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo04g00428 1169 PANTHER MYOSIN 80 321 - -
Blo04g00428 1169 ProSiteProfiles IQ motif profile. 922 951 IPR000048 GO:0005515
Blo04g00428 1169 Pfam IQ calmodulin-binding motif 900 919 IPR000048 GO:0005515
Blo04g00428 1169 Pfam IQ calmodulin-binding motif 853 871 IPR000048 GO:0005515
Blo04g00428 1169 Pfam IQ calmodulin-binding motif 874 892 IPR000048 GO:0005515
Blo04g00428 1169 Pfam IQ calmodulin-binding motif 924 940 IPR000048 GO:0005515
Blo04g00428 1169 Gene3D Kinesin motor domain 118 329 IPR036961 -
Blo04g00428 1169 ProSiteProfiles IQ motif profile. 852 879 IPR000048 GO:0005515
Blo04g00428 1169 SMART iq_5 898 920 IPR000048 GO:0005515
Blo04g00428 1169 SMART iq_5 849 871 IPR000048 GO:0005515
Blo04g00428 1169 SMART iq_5 921 943 IPR000048 GO:0005515
Blo04g00428 1169 SMART iq_5 872 894 IPR000048 GO:0005515
Blo04g00428 1169 Pfam Myosin head (motor domain) 347 836 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo04g00428 1169 Pfam Myosin head (motor domain) 151 320 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo04g00428 1169 Gene3D Kinesin motor domain 349 784 IPR036961 -
Blo04g00428 1169 PRINTS Myosin heavy chain signature 275 302 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo04g00428 1169 PRINTS Myosin heavy chain signature 542 570 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo04g00428 1169 PRINTS Myosin heavy chain signature 595 623 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo04g00428 1169 PRINTS Myosin heavy chain signature 179 198 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo04g00428 1169 PRINTS Myosin heavy chain signature 233 258 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo04g00428 1169 Coils Coil 981 1001 - -
Blo04g00428 1169 Gene3D - 365 425 - -
Blo04g00428 1169 PANTHER MYOSIN 350 1167 - -
Blo04g00428 1169 Gene3D Myosin VI head, motor domain, U50 subdomain 427 724 - -
Blo04g00428 1169 ProSiteProfiles IQ motif profile. 873 902 IPR000048 GO:0005515
Blo04g00428 1169 ProSiteProfiles Myosin motor domain profile. 149 848 IPR001609 GO:0003774|GO:0005524|GO:0016459
Blo04g00428 1169 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 80 321 - -
Blo04g00428 1169 Gene3D - 552 746 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00005 Blo-Chr4:53343 Blo04g00428 Blo-Chr4:3505954 0 dispersed
Blo04g00428 Blo-Chr4:3505954 Blo08g00355 Blo-Chr8:5615448 0 dispersed
Blo04g00428 Blo-Chr4:3505954 Blo18g00260 Blo-Chr18:2747475 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00428 - K10357 cit:102621697 1650.95