Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00450 ATGGCCAATCAACTCTACGCCTACAATCTCTCCTCATTCGGGACGGCACCTGCTTCTGCTCCTGATCCTGCCCCTGCTCCGTCGTCTCTGTCCACTATATATTCGTCCTCGCGTTCCCTCTCGGATATTGTTTCTACTCGCTACCTTATCTCTGAATCACTCGCTTCCAATCTCGCTAGCAAGTACTCCACTGTCACTGATCCAAGTGCTTCTATATATTTGAACCAGAGCGATGTCCTCAGGTTTGCTTCCTCCCAGAATGCCTCCCGAACTCCGCATTATGTCCCCCAATCTTCATGGCTTGTTGCTGACGTAGAGCCTTCACTCGACTCTGTTTCCGGAATGAAACGTTCTTCTGATGTGCTGTACGAGACTATTTTGGGTACCCGTGACACGGTTGGGCCAAGTCAAGCTTGGTATACTACAAATTCTTTAGCCAAGCGCACTAGATTTGAAAGTGCAAGCAATATTCCTTTATATCCACAGAGGCCAGGGGAGAAGGACTGTGCCCACTATATGCTCACAAGAACCTGTGGATTTGGAAATAGCTGCAAGTTTGATCATCCTATTTGGGTTCCTGAAGGTGGAATTCCAGATTGGAAAGAGATAGGAATCGATTGGTTCTTATCAATTGGTATCAGAGCAGTCGTCATAAGGGCTTACAAAGAAAATATGGATAGAATTTCAAGGGTCATAGAGAATCATGCTTTCTTGAAGGAGCACATGGAGAAATTATTGGAGGAGTCGAGGAAAAGGGAATAG 762 46.06 MANQLYAYNLSSFGTAPASAPDPAPAPSSLSTIYSSSRSLSDIVSTRYLISESLASNLASKYSTVTDPSASIYLNQSDVLRFASSQNASRTPHYVPQSSWLVADVEPSLDSVSGMKRSSDVLYETILGTRDTVGPSQAWYTTNSLAKRTRFESASNIPLYPQRPGEKDCAHYMLTRTCGFGNSCKFDHPIWVPEGGIPDWKEIGIDWFLSIGIRAVVIRAYKENMDRISRVIENHAFLKEHMEKLLEESRKRE 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3710985 3715904 - BLOR13362 Blo04g00450 59478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00450 253 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 165 189 IPR000571 GO:0046872
Blo04g00450 253 Coils Coil 228 248 - -
Blo04g00450 253 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 37 74 202 - -
Blo04g00450 253 SUPERFAMILY CCCH zinc finger 165 190 IPR036855 GO:0046872
Blo04g00450 253 Gene3D - 133 202 - -
Blo04g00450 253 ProSiteProfiles Zinc finger C3H1-type profile. 163 191 IPR000571 GO:0046872
Blo04g00450 253 PANTHER CCCH ZINC FINGER/TIS11-RELATED 74 202 IPR045877 GO:0003729
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00450 Blo13g00612 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00450 Blo-Chr4:3710985 Blo11g00410 Blo-Chr11:3563205 2.70E-07 dispersed
Blo04g00449 Blo-Chr4:3705378 Blo04g00450 Blo-Chr4:3710985 9.67E-06 tandem
Blo13g00612 Blo-Chr13:28536186 Blo04g00450 Blo-Chr4:3710985 3.27E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12255 PF00642 zf-CCCH 2.10E-07 CL0537 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00450 - - csv:101212896 229.95