Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00460 ATGAGAACGATTTATTACCTTCTTCACTACAAGGCATCATCTGACCAGATGGTGCTTGTACAAAATGTTATTCTTTCCTCTGTTTCGTTGTCTTACAAATTCTCTCTTTTTCAAAAGGACATCGACGTTAAAAGTAACTTTTGGTCTTTTGGTTCTTTTAAGGCTGCTGTGAAATATGTGGAAAAGAAAGACAAATCGAATGGCTCTTTGACTAATACTATGAGGAGAGCATTGACTGATGTCAGCAATATCCAGTCAAACTCTTCTGCTAAGAAGGTGCTTCATGATGGTTCCAAACCTATGATTCCAATGGGCAGACCCAATAAGATTGATGTCTCAACACGAAAGTCCTTGGTGAAGACTCAAATAAATTCAAATAAAGGGGCTGGTAATTCACAAATTGCAGACAAAGTCTTTGTTAAAGGACTAAAAACTTCAAATGATCGAAGCTTGAAGATATATAGAGAGAGCGGTGATTTCTCTTGCGTAGTTGGCAAGAGGACTGCAAAAGTTTCTTTGATATCATCAAGGAGGTCGTTACCAGTTTTAAAGGGAGTGAATGGAGAAAATGCGACTAATTCAAAGTTGGTCGAGGAATATACATCAGTTACTAAGCAGGATAAGCTACCAATCATTGATAATGAACATAATCAACTTGAAGTTGCTGAATACGTCGAGGAAATTTATCAATATTATTGGGTTATGGAGGCGGAAAGTCCATCTTTGGAAAATTACCTATTGAAGCAGATGGATATTTTACCTCAAATGCGGGGAATATTGGTCAATTGGCTTAATGAAGTACACTTCAAATTTGATTTGATGCATGAAACACTATTTCTTACAGTCATGTTGTTTGACCAATTTCTTTCTCAAGTCATAACTAAGAAGGATGATCTGCAATTAGTTGGTCTTACGGCTCTGTTGTTGGCTTCAAAATATGAAGACTTTTGGCATCCAAGGGTTACAGATTTAATAAGCATTTCAGCTGAATCTTATACAAGAGAACAAATGCTTGAAATGGAAATGCTTATTCTTAGGAAGCTTAAATTTCGTCTTAATATACCTACTCCATATCTTTTCATGTTAAGGTTTCTCAAGGCTGCTCAATCTGACACTAAGCTTGATCACCTGGCATTTTACCTCATTGAGCTATGCTTAGTTGAATATGAAGCTTTAAAGTTCAAATCATCGCTGCTTTGTGCATCAGCTATTTATCTTGCAAGGTGTACCCTGCAAATAAGTCCATCTTGGACTCCGCTACTAAGCAAACATACACATTATGAAGTGTCCCATTTGAGAGAATGCGCTGAGATGATTTTAAAATTACAAAGATCTGCCAAATTAGGACGATTGAAGGTCACTTTTGAGAAGTATATGAAGCCTGATTTTAGTAGTGTTGCATCGATGAAGCCTTTAGATGCGCTACCTTCCTAG 1434 36.89 MRTIYYLLHYKASSDQMVLVQNVILSSVSLSYKFSLFQKDIDVKSNFWSFGSFKAAVKYVEKKDKSNGSLTNTMRRALTDVSNIQSNSSAKKVLHDGSKPMIPMGRPNKIDVSTRKSLVKTQINSNKGAGNSQIADKVFVKGLKTSNDRSLKIYRESGDFSCVVGKRTAKVSLISSRRSLPVLKGVNGENATNSKLVEEYTSVTKQDKLPIIDNEHNQLEVAEYVEEIYQYYWVMEAESPSLENYLLKQMDILPQMRGILVNWLNEVHFKFDLMHETLFLTVMLFDQFLSQVITKKDDLQLVGLTALLLASKYEDFWHPRVTDLISISAESYTREQMLEMEMLILRKLKFRLNIPTPYLFMLRFLKAAQSDTKLDHLAFYLIELCLVEYEALKFKSSLLCASAIYLARCTLQISPSWTPLLSKHTHYEVSHLRECAEMILKLQRSAKLGRLKVTFEKYMKPDFSSVASMKPLDALPS 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3826943 3833278 + BLOR13372 Blo04g00460 59488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00460 477 CDD CYCLIN 353 440 IPR013763 -
Blo04g00460 477 Pfam Cyclin, C-terminal domain 355 471 IPR004367 -
Blo04g00460 477 CDD CYCLIN 256 345 IPR013763 -
Blo04g00460 477 Gene3D - 241 353 - -
Blo04g00460 477 SMART cyclin_7 359 441 IPR013763 -
Blo04g00460 477 SMART cyclin_7 262 346 IPR013763 -
Blo04g00460 477 Gene3D - 227 468 - -
Blo04g00460 477 SMART Cyclin_C_2 355 472 IPR004367 -
Blo04g00460 477 Pfam Cyclin, N-terminal domain 227 353 IPR006671 -
Blo04g00460 477 PIRSF Cyclin_A_B_D_E 49 477 IPR039361 -
Blo04g00460 477 MobiDBLite consensus disorder prediction 89 109 - -
Blo04g00460 477 SUPERFAMILY Cyclin-like 354 474 IPR036915 -
Blo04g00460 477 PANTHER CYCLINS 45 474 IPR039361 -
Blo04g00460 477 SUPERFAMILY Cyclin-like 216 353 IPR036915 -
Blo04g00460 477 PANTHER CYCLIN-B3-1-RELATED 45 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00460 Blo-Chr4:3826943 Blo08g00138 Blo-Chr8:1455470 2.63E-67 dispersed
Blo11g00966 Blo-Chr11:21844441 Blo04g00460 Blo-Chr4:3826943 1.16E-16 transposed
Blo12g00976 Blo-Chr12:27814784 Blo04g00460 Blo-Chr4:3826943 1.71E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00460 K21777 - tcc:18594958 419.083