Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00461 ATGCCTTTTCAGTCTGCGACTGTCGCGTTACTACTGTCCGATAACGCGGTTGGCTCACTATTGAGCTTTTCTCGCTGGTCTTTTGGTAAACAATATAAGATTGCTGAGTATTACAAGAACCAAAAGATGCTCCTCCAAGGGTTTGATGAGATGGAGACCATAAATGAATCTGGTTATTTTCCTGGAAATCTAACTGAGGACGAAGTAAATCAGCTTGCGAGAAGCGAGAGGATAGCAATTCACGCGTCAAACATAGCCAATATTGTACTTTTTGTGGCGAAAGTTTATGCATCAGCCGAGAGTAGATCATTGGCTGTCATAGCCTCAACTTTAGATTCCTTCTTGGATCTCATATCAGGGTTTATTCTCTGGTTCACCACCAACGCTATGAAAAACCCAAACCAATATCACTATCCAATCGGAAAGAATCGAATGCAGCCCGTGGGCATCATCGTGTTTGCATCAGTAATGGCGACTCTTGGGTTACAAATACTGCTAGAGTCTGCTCGGCAACTCATTACAAAGTCTAAGCCCAACACAGATGGAGAGAAGGAGAAGTGGATGATCGGGATTATGCTATTTGCATTGGTCGTGAAGTTTGTGCTAATGATCTACTGCAAAAGATTTAGAAACGGCATAGTTAGAGCCTATGCGCAAGATCATTTCTTTGACGTCATCACAAATTCAGTCGGCCTTGGAGCCGCCGTTCTGGCCATCCATTTCTACTGGTGGATCGATCCCACGGGCGCCATAATAATAGCAGTCTACACTATAAACACATGGGCAAGGACGGTAATGGAGAACGTGAGGTCGCTGATCGGAAGAACGGCGCCGCCTGATTTCTTGGCGAAGATAACGTACTTGATATGGAACCACGACAAGGAGATAAAGAAGATAGACACGGTGAGGGCCTACACATTTGGAAGCCATTACTTCGTGGAAGTGGACATAGTTTTGGCAGAGGACATGCTGCTGAGCCAAGCGCATAATATTGGGGAGACTTTGCAAGAGAAGCTGGAGCAGCTTCCTCAGGTGGAGCGCGCATTTGTCCACATTGATTTCGAGTTCACTCACGCCCCTGAGCATAAGCCCAAGCTCAAGCCTTGA 1107 45.89 MPFQSATVALLLSDNAVGSLLSFSRWSFGKQYKIAEYYKNQKMLLQGFDEMETINESGYFPGNLTEDEVNQLARSERIAIHASNIANIVLFVAKVYASAESRSLAVIASTLDSFLDLISGFILWFTTNAMKNPNQYHYPIGKNRMQPVGIIVFASVMATLGLQILLESARQLITKSKPNTDGEKEKWMIGIMLFALVVKFVLMIYCKRFRNGIVRAYAQDHFFDVITNSVGLGAAVLAIHFYWWIDPTGAIIIAVYTINTWARTVMENVRSLIGRTAPPDFLAKITYLIWNHDKEIKKIDTVRAYTFGSHYFVEVDIVLAEDMLLSQAHNIGETLQEKLEQLPQVERAFVHIDFEFTHAPEHKPKLKP 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3837993 3839625 - BLOR13373 Blo04g00461 59489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00461 368 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 277 353 IPR036837 -
Blo04g00461 368 SUPERFAMILY Cation efflux protein transmembrane domain-like 75 274 IPR027469 -
Blo04g00461 368 Gene3D Cation efflux protein, cytoplasmic domain 276 354 IPR036837 -
Blo04g00461 368 Pfam Dimerisation domain of Zinc Transporter 278 353 IPR027470 -
Blo04g00461 368 Gene3D Cation efflux protein transmembrane domain 77 272 IPR027469 -
Blo04g00461 368 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 28 365 - -
Blo04g00461 368 PANTHER METAL TOLERANCE PROTEIN 9 28 365 - -
Blo04g00461 368 Pfam Cation efflux family 82 273 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Blo04g00461 368 TIGRFAM CDF: cation diffusion facilitator family transporter 82 353 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01009 Blo-Chr3:36381976 Blo04g00461 Blo-Chr4:3837993 1.87E-118 dispersed
Blo04g00291 Blo-Chr4:2237170 Blo04g00461 Blo-Chr4:3837993 6.95E-151 dispersed
Blo04g00461 Blo-Chr4:3837993 Blo13g00896 Blo-Chr13:31505519 2.53E-148 dispersed
Blo04g00461 Blo-Chr4:3837993 Blo04g00098 Blo-Chr4:845403 2.15E-149 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00461 - - dcr:108211948 572.007