Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00462 ATGGTGGGTCTGAGAGTAGGAAGCCTGGTTGTGCAGAGAATTGCGATTCTCAACACTTTAATGGCTTCTTCTTTGTACCCATCTCCAATTCTGGAATCCACTATACTTAGTGCACTCTCTTTCGTCTTCAATTTACTTGATACCCAGTTCAGTATGTCCTTGTTTTCTCCGAATTCTGGTTCTATTTCACAGTGGAAGCTGCCATTTCTTCAGAGAGACGCAGAGCGAAGAAGTGGTTCAGTGAAACGTGAAGAATTAACGGGAAGGTGCCAGCACAAATTGGGCAGAGGTCACCGTGACAAACTCCAGCAGTTTATGACTATAACTGGTGCGAGTGAAAAGATTGCTCTTCAGGCTTTGAAAGCAAGTGATTGGCATCTTGAAGGAGCATTTGATGCATTTTACAGTCAACCGCAGATTAAATCATTTACTGATTCGAGACATTTGGAAGAGCTTTATAATAGATATAGAGGCAAGCTTCTCTTCTATAATCCTCGCATTGATATGATTCTGGCTGATGGTATCACTGTTCTCTGCAGTGATATTCAGGTAAAGGGTTTGGCTGTTGATCCTCAAGACATAGTCATGTTGGTTGTCTCGTGGCACATGAAGGCGAATACTATGTGTGAATTTTCAAAACAGGAGTTTATAGGTGGATTGCTATCCTTGGGGATCGATTCCCTTGAGAAGTTTCGGGAAAGGATACCATTTATGCGCTCAGAGCTGAAAGATGAACATAAGTTCCGTGAAATCTACATCTTTGCATTTGGATGGGCAAAAGAAAAGGGTCAAAAATCTTTGGCATTGGACACGGCAATAGGAATGTGGCAATTACTGTTTGCTGAAAGGCACTGGCCCCTGGTTGATCACTGGTGTCAATTCCTACAGGTTCGGCACAATAAAGCAATCTCAAGGGACACATGGTCTCAGCTATTGGAGTTTGCTAGGACGGTAGACCCTACACTATCAAATTACGATGCTGAAGGAGCTTGGCCATATCTTATTGACGAATTCGTCGAATACTTAAATGAGAACGGGGTTATCCAAAATGATCAGTTGGATCAGTTGAGCTCCAAACGATGA 1083 42.66 MVGLRVGSLVVQRIAILNTLMASSLYPSPILESTILSALSFVFNLLDTQFSMSLFSPNSGSISQWKLPFLQRDAERRSGSVKREELTGRCQHKLGRGHRDKLQQFMTITGASEKIALQALKASDWHLEGAFDAFYSQPQIKSFTDSRHLEELYNRYRGKLLFYNPRIDMILADGITVLCSDIQVKGLAVDPQDIVMLVVSWHMKANTMCEFSKQEFIGGLLSLGIDSLEKFRERIPFMRSELKDEHKFREIYIFAFGWAKEKGQKSLALDTAIGMWQLLFAERHWPLVDHWCQFLQVRHNKAISRDTWSQLLEFARTVDPTLSNYDAEGAWPYLIDEFVEYLNENGVIQNDQLDQLSSKR 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3840798 3846213 + BLOR13374 Blo04g00462 59490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00462 360 Gene3D - 96 137 - -
Blo04g00462 360 ProSiteProfiles DCUN1 domain profile. 144 343 IPR005176 -
Blo04g00462 360 PANTHER RP42 RELATED 103 350 IPR014764 -
Blo04g00462 360 Gene3D Cullin, PONY binding domain 244 347 IPR042460 -
Blo04g00462 360 SUPERFAMILY UBA-like 97 136 IPR009060 GO:0005515
Blo04g00462 360 CDD UBA_DCNL 98 138 - -
Blo04g00462 360 Pfam Cullin binding 231 341 IPR005176 -
Blo04g00462 360 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 103 350 - -
Blo04g00462 360 Pfam UBA-like domain 99 137 - -
Blo04g00462 360 Gene3D - 143 243 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00462 Blo13g00602 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00462 Blo-Chr4:3840798 Blo07g00680 Blo-Chr7:22151830 5.00E-14 dispersed
Blo10g00135 Blo-Chr10:1531267 Blo04g00462 Blo-Chr4:3840798 2.03E-22 transposed
Blo13g00602 Blo-Chr13:28431058 Blo04g00462 Blo-Chr4:3840798 1.07E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00462 K17822 - tcc:18594929 462.611