Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00463 ATGAAACCATGTCCGAATTACCAGAATGGATGCAATGGGAGGAGATACGAGGCTCCTCCAGGACCTGAAAATGGAGGAGAAGAAAAAGGAAAGGGGTGCAAAGTGAACGTTATACAAAGAGGATTCTCCAAATTGGTAGATGGAGCCGTGATTAATGCCAGAGCCACCGACATATGGCAGACCAATACAAGCTTCCCATACGTATGCTTTTTCGTTCTCCGAAAAGTCGCAGAGAAGCAGCTTCTGAGCTCTCCATTAGCTAGGGTTGGTTGTTTGGGCGGCTTTCTTCGCTTACGTCTTCCACTTCTTCTTCTATCAGCTCGAAGAAGCTCTGTATCAATGGCTGCCTCTTCTTCGCTTCTCCGATCTGCTGTCAGTGTTCCTTTGTTTGAAGCCTCCTTTTCCGAGCTTTCTTCGTCGCGAAATCTTTCATTCACCAACCTTAGCACTTCAAAGCATCAATCGGGTATTTTCCGTGCAAGGGTATCAAGCGGCCCATCTTCCTTACAATTTTTTTTTTTGTTCAGAACAAGTAGGATCCGCAGTTTTGAACCGATTAAAGCCACGGCTACAGAAGCACCTCCTGCAGTTCAAAAATCACGGACTGGAGGAAAGACGAAGATTGGGATCAATGGTTTTGGTCGTATAGGAAGGTTGGTATTAAGAGTTGCTATTTCAAGAGATGATATTGATGTGGTGGCAGTTAATGATCCTTTCATTGACGCTAAATACATGGCTTACATGTTCAAATATGATTCTACACACGGAGGATTCAAAGGAACCATCAAGTTATTGGATGAATCCATTTTGGAAATTAATGGGAAGCAAATAAAAGTAATTAGCAAAAGGGACCCAGCTGAGGTTCCTTGGGATGGTTATGGGGCAGAGTTTGTTGTTGAATCATCTGGTGTTTTCACGACCATGGAGAAGGCTTCAGCACACTTGAAGGGTGGTGCCAAAAAAGTAGTCATATCAGCTCCATCTGCAGATGCTCCTATGTTTGTAGTTGGAGTTAATGAGAAGAGTTACAAACCAAACATGGATATTGTCTCAAATGCAAGCTGTACAACAAATTGTCTTGCACCTCTTGCCAAGGTGGTGCATGAGGAATTTGGTATTTTGGAAGGTCTTATGACAACTGTTCATGCAACTACAGCAACTCAGAAGACTGTTGATGGACCTTCAATGAAGGATTGGCGAGGAGGCCGCGGAGCAGGCCAAAATATAATTCCTAGTTCAACAGGTGCTGCAAAGGCTGTAGGAAAAGTTCTCCCTGAGCTTAATGGAAAACTTACTGGAATGGCATTCCGCGTACCTACACCCAATGTATCTGTTGTGGACTTAACCTGTAGACTTCAGAAGAAGGCATCTTATGACGATGTCAAAGCTGCAATCAAGTATGCAGCTGAAGGTCCACTTAGAGGCATCCTCGGATTCACTGATGAAGATGTTGTTTCCAACGATTTTGTTGGTGATTCAAGGTCAAGTATATTTGATGCAAAGGCCGGAATAGGTCTCAGCTCCTCCTTCATGAAGCTCGTCGCATGGTACGACAACGAATGGGGTTACAGCAACCGAGTGCTGGACCTGATAGAGCACATGGCGATGGTGGCGGCTCACAACTAA 1626 44.46 MKPCPNYQNGCNGRRYEAPPGPENGGEEKGKGCKVNVIQRGFSKLVDGAVINARATDIWQTNTSFPYVCFFVLRKVAEKQLLSSPLARVGCLGGFLRLRLPLLLLSARRSSVSMAASSSLLRSAVSVPLFEASFSELSSSRNLSFTNLSTSKHQSGIFRARVSSGPSSLQFFFLFRTSRIRSFEPIKATATEAPPAVQKSRTGGKTKIGINGFGRIGRLVLRVAISRDDIDVVAVNDPFIDAKYMAYMFKYDSTHGGFKGTIKLLDESILEINGKQIKVISKRDPAEVPWDGYGAEFVVESSGVFTTMEKASAHLKGGAKKVVISAPSADAPMFVVGVNEKSYKPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATTATQKTVDGPSMKDWRGGRGAGQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLQKKASYDDVKAAIKYAAEGPLRGILGFTDEDVVSNDFVGDSRSSIFDAKAGIGLSSSFMKLVAWYDNEWGYSNRVLDLIEHMAMVAAHN 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3846877 3852750 - BLOR13375 Blo04g00463 59491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00463 541 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 353 360 IPR020830 GO:0016620
Blo04g00463 541 Gene3D Dihydrodipicolinate Reductase; domain 2 355 521 - -
Blo04g00463 541 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 473 488 IPR020831 GO:0016620
Blo04g00463 541 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 349 367 IPR020831 GO:0016620
Blo04g00463 541 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 314 327 IPR020831 GO:0016620
Blo04g00463 541 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 376 392 IPR020831 GO:0016620
Blo04g00463 541 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 433 450 IPR020831 GO:0016620
Blo04g00463 541 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 205 371 IPR036291 -
Blo04g00463 541 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 207 307 IPR020828 GO:0051287
Blo04g00463 541 SMART gp_dh_n_7 206 355 IPR020828 GO:0051287
Blo04g00463 541 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 354 517 - -
Blo04g00463 541 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 207 529 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Blo04g00463 541 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 116 540 IPR020831 GO:0016620
Blo04g00463 541 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 116 540 - -
Blo04g00463 541 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 360 517 IPR020829 GO:0016620
Blo04g00463 541 Gene3D - 207 534 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00463 Blo13g00601 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00463 Blo-Chr4:3846877 Blo04g01180 Blo-Chr4:21037178 6.52E-166 dispersed
Blo11g00641 Blo-Chr11:6636088 Blo04g00463 Blo-Chr4:3846877 5.84E-169 transposed
Blo13g00601 Blo-Chr13:28426206 Blo04g00463 Blo-Chr4:3846877 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00463 K00134 - pvy:116124435 676.781