Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00465 ATGGCTACTAAGAGGAGCGTGGGCACTCTGACGGAGCCAGATTTGAAGGGGAAGAGAGTGTTTATGAGAGTGGATCTGAATGTCCCATTGGATGATAACTTCAATATCACTGACGACACCAGAATCCGCGCTGCTGTGCCTACTATTAAGTACTTGTTAGGTCATGGAGCTAGGGTCGTCCTTTCCAGCCACTTGGGACGCCCGAAAGGTGTGACACCCAAATATAGCTTGAAGCCTCTTGTGGCAAGACTGTCTGAACTCCTTGGCACTGAGGTTAAAATTGCCAACGATTGTATTGGAGCGGAAGTTGAGAAATTGGTCGCTGAATTACCTAATGGAGGTGTGTTGCTTCTTGAGAATGTGAGGTTCTACAAGGAGGAAGAGAAGAACGACCCAGAGTTTGCAAAGAAGCTAGCTTCTCTTGGAGATATCTATGTGAATGATGCATTTGGCACTGCTCATAGAGCTCATGCTTCAACAGAGGGAGTGGCTAAATACTTAAAACCTTCTGTTGCTGGATTTCTTATGCAGAAGGAACTTGACTATCTTGTTGGAGCTGTTGCAAATCCCAAGAGACCGTTTGCTGCCATTGTTGGTGGGTCAAAGGTATCTTCGAAGATTGGCGTGATTGAGTCCTTACTGGAGAAGGTTGATGTTCTCTTGTTGGGAGGAGGAATGATCTTTACCTTCTACAAGGCACAAGGGTATTCAGTTGGGTCATCCCTTGTTGAGGAAGACAAGCTTGATCTTGCTACCTCCCTTATGGAGAAGGCCAAAAATAAGGGGGTCTCTTTGCTACTTCCAACCGATGTGGTCATTGCTGATAAATTTGCTCCTGATGCTAATAGCATGATCGTTCCGGCATCAGGTATCCCAGATGGTTGGATGGGATTGGATATTGGGCCTGATTCCATCAACACATTCAGCGAAGCTTTGGATTCGACAAAAACCATAATTTGGAATGGACCCATGGGCGTGTTTGAGTTTGATAAGTTTGCTGCTGGAACAGAGGGGTCATTTCTGCTGTTGCAGGCAATTGCCAGGAAGCTTGCCGACCTCAGTGGGAAGAACGTGACGACCATTATTGGAGGAGGAGACTCTGTGGCAGCAGTGGAAAAGGTTGGGCTCGCGGACAAGATGAGCCACATCTCCACCGGAGGTGGTGCCAGCTTAGAGCTTCTAGAAGGGAAGCCACTTCCGGGTGTCCTCGCTCTCGACGATGCTTGA 1227 47.68 MATKRSVGTLTEPDLKGKRVFMRVDLNVPLDDNFNITDDTRIRAAVPTIKYLLGHGARVVLSSHLGRPKGVTPKYSLKPLVARLSELLGTEVKIANDCIGAEVEKLVAELPNGGVLLLENVRFYKEEEKNDPEFAKKLASLGDIYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVANPKRPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGYSVGSSLVEEDKLDLATSLMEKAKNKGVSLLLPTDVVIADKFAPDANSMIVPASGIPDGWMGLDIGPDSINTFSEALDSTKTIIWNGPMGVFEFDKFAAGTEGSFLLLQAIARKLADLSGKNVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKPLPGVLALDDA 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3858254 3860684 - BLOR13377 Blo04g00465 59493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00465 408 PRINTS Phosphoglycerate kinase family signature 195 214 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 PRINTS Phosphoglycerate kinase family signature 141 163 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 PRINTS Phosphoglycerate kinase family signature 383 400 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 PRINTS Phosphoglycerate kinase family signature 360 371 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 PRINTS Phosphoglycerate kinase family signature 14 30 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 PRINTS Phosphoglycerate kinase family signature 36 58 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 PRINTS Phosphoglycerate kinase family signature 113 128 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 PRINTS Phosphoglycerate kinase family signature 172 194 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 Gene3D - 8 184 IPR015824 GO:0004618|GO:0006096
Blo04g00465 408 Hamap Phosphoglycerate kinase [pgk]. 9 407 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 CDD Phosphoglycerate_kinase 10 407 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 Gene3D - 187 407 IPR015824 GO:0004618|GO:0006096
Blo04g00465 408 ProSitePatterns Phosphoglycerate kinase signature. 19 29 IPR015911 GO:0004618|GO:0006096
Blo04g00465 408 PANTHER PHOSPHOGLYCERATE KINASE, CYTOSOLIC 1 408 - -
Blo04g00465 408 Pfam Phosphoglycerate kinase 12 397 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 SUPERFAMILY Phosphoglycerate kinase 9 407 IPR036043 GO:0004618|GO:0006096
Blo04g00465 408 PANTHER PHOSPHOGLYCERATE KINASE 1 408 IPR001576 GO:0004618|GO:0006096
Blo04g00465 408 PIRSF Pgk 3 408 IPR001576 GO:0004618|GO:0006096
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00465 Blo15g00633 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01395 Blo-Chr7:34019098 Blo04g00465 Blo-Chr4:3858254 6.95E-43 transposed
Blo15g00633 Blo-Chr15:16594365 Blo04g00465 Blo-Chr4:3858254 0 transposed
Blo13g00599 Blo-Chr13:28414040 Blo04g00465 Blo-Chr4:3858254 2.29E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00465 K00927 - tcc:18594857 713.761