Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00467 ATGGTGGCTTCTGGAACTCCTTCTGTTGCCGTCCCGTCTCCAAATCAGCCCCCAGCCCCTTTTTCCAACTCACCTCACCAGCTTGCATTCCAGCAGGCACAGCACTTCCATCAGCAGCAGCAGCAGCAACAACAGCACCAACTTCAAGTGTTTTGGGCCAACCAAATGCAAGAAATTGAGCAGACAACTGACTTCAAGAACCACAGTCTTCCACTCGCTAGGATAAAGAAAATAATGAAAGCCGATGAAGACGTTCGGATGATATCAGCCGAAGCCCCAGTGATATTTGCAAAGGCGTGTGAAATGTTCATTCTTGAGCTGACCTTGCGCTCTTGGATCCACACAGAAGAGAACAAGAGAAGAACTCTTCAGAAAAACGATATAGCAGCTGCCATTTCGAGGACAGATGTCTTTGATTTCTTGGTCGATATTATTCCGAGGGATGAGTTGAAGGAGGAGGGATTGGGAGTGACCAAAGGCGCTCTCCCGGTTGTTGGTTCCCCAGCCGATCTTCCTTATTACTATGTCCCACCACACCCAGTTGGACCTGCAGGTATGATCATGGGAAAGCCGGTAGTAGATCCAGCTGCAATGTACGGAGCTCAACAGCCTCGACCACCTATGGCTTTCATGCCATGGCCCCATAGCCAGCCTCAGCCAGATCAAAACGAAGCATAA 678 49.56 MVASGTPSVAVPSPNQPPAPFSNSPHQLAFQQAQHFHQQQQQQQQHQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGALPVVGSPADLPYYYVPPHPVGPAGMIMGKPVVDPAAMYGAQQPRPPMAFMPWPHSQPQPDQNEA 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3880174 3880851 - BLOR13379 Blo04g00467 59495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00467 225 Pfam Core histone H2A/H2B/H3/H4 16 132 IPR007125 GO:0003677
Blo04g00467 225 MobiDBLite consensus disorder prediction 1 25 - -
Blo04g00467 225 SUPERFAMILY Histone-fold 35 141 IPR009072 GO:0046982
Blo04g00467 225 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 10 220 - -
Blo04g00467 225 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 10 220 - -
Blo04g00467 225 Gene3D Histone, subunit A 30 147 IPR009072 GO:0046982
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g01104 Blo-Chr2:42020477 Blo04g00467 Blo-Chr4:3880174 2.12E-29 dispersed
Blo04g00467 Blo-Chr4:3880174 Blo04g01166 Blo-Chr4:20154829 1.32E-69 dispersed
Blo11g00489 Blo-Chr11:4507897 Blo04g00467 Blo-Chr4:3880174 5.28E-67 transposed
Blo13g00597 Blo-Chr13:28401234 Blo04g00467 Blo-Chr4:3880174 1.15E-117 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12257 PF00125 Histone 1.20E-18 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00467 K08066 - zju:107417913 363.614