Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00468 ATGCTCAGGCTAATATTCTCTTCTAGACAACTTTTGCTTTCTTCTCAGAAAAGCCCAGTGCGGGAGAGGTGGAATATTTTCACGTCCTTAAACTGTTCGACAATATGTCCCACAGAAGGAGAAAGCGTCGCTACTACTTCAGATTGTCTGAATGACTCCACAGATTTGTTGAGGAGATGGGGTTGCACCGATGGAGACGTAGCGAGGATATTTGCGCGAAGGCCATCTTTACGCAACGCTGATCTCAATCAACTTGAGCAAAAACTCAGTTTACTAAAAGACTTGGGAATTACTTCGCCTGATCTAGTTAAGATCATCCATTGTCGCCCCCGTTTCTTCAGCTGTCGAATCAATAATAACTTCGCCGAGCGGATTGATTTTTTCATGACATTGTTCGATTCAAAGCCTGTTCTTGTCAAAGCCATTGTGAGAAATCCGTCTCTATTGACTTACGATTTTCACCATAAAATCAAGCCTGTCATGGCTCTATATAAAGAAATGGGTGTAAGCAAAAAGGATTTGATACTTATGCTGATATCCCGGCCCACTTTGATTCCTCGAACTTCATTTGATGATGAGAAAGTGGAATACATTTGCAGAACCGGGGTTTCAAAGGATGCTACAATGTATAAATATGTTGTCACTATCATTGGCATCTCACGGCTCGAGACTATCCGTCGTAAAGTGGCAAATCTAGAGAAGTTCGGGTTTACAGAGGACGAGATTTTCTGTTTTTTTGGACGATCCCCTCTTATTCTAACTCTATCAGTGGATAAGGTTCAGAGGAATATGACATTCATTCTCTGCACATTGAAGATGCCTGCTAATGTAGTTATTCAGCACCCATTTTTGTTGTACTCCAATCTGGAAACTGTGTTGAAGCCTCGATTAAAACTCTCGATGAAGATGCAAGAAATGAATCTTAATTTGCAGATTAGGGGCCATGAAATGCTCAAAGCACTTAGGATGAAGGAGAAGAGGTTTTTAAAGGCGTTTGTGAGGAGTCAACCGAAAGAGGTTGCAGCGGAGCTGATAGAGTTCTATACCAGTGCAAAAGGAATCAAGAGGTCGTTGAATTTTAATCACTTGCAAGTGCGAGTGACTGGAAGGGGAGGTCTTCAATGGTGGAATGTTTCACAGGGTCTTAATTCAATGGCTGAAACTAGGTTTCAAGTTGGCGTGTTATCCTTGAAGTTGAATGCTGCTTCATTGAAGTTAAAACAGTGCATTAAGAGATCAATTCACTTGAGAGCTAAGCCAACATCTGTACCACATAAAATATCTGGTCTAGTTCCTCGTATCATGGCTTCCTCAGTTGCTGGCAAAATAGTTGAATCTTCTACACAATCCTTATATGCAAACGAACCAGTTGTGTCTGTGGATTGGCTTCATGCTAACCTTAAAGAGCCTGAATTAAAGGTATTAGATGCATCATGGTACATGCCAGATGAACAGAGAAATCCAATCCAAGAATACCAGGTTGCTCATATTCCTGGTGCCATTTTCTTTGATCTAGATGGGATAGCAGATCGAACCACAAAGTTGCCGCATATGTTGCCATCGGGGGAAGCTTTTGCTGCTGCTGTATCTGCTCTTGGCATCCAGAACAAGGATGGAGTAGTTGTTTACGATGGGAAGGGAATCTTTAGTGCGGCCCGCGTCTGGTGGATGTTCCGAGTATTTGGACACGAAAGAGTGTGGGTATTAGATGGTGGCCTACCAAGATGGCGTGCAGCTGGATATGATGTTGAATCCAGTGCTTCCAGTGATGCAATTCTGAAAGCTAGTGCCGCAAGTGAGGCAATAGAGAAAGTTTATCAAGGCCAGGCTGTTGGGCCAATCACATTTCAAACAAAATTTCAGCCACATCTTGTGTGGGGCATTGAACAGGTTAAAAGAAATATTGAGGAGAAATCTCATCTGCTCATAGATGCCAGATCAAAACCCAGATTTGATGGAGCTGTACCAGAGCCTAGGAAAGGTATAAGAAGCGGGCATGTTCCTGGCAGTAAGTGCGTTCCTTTTCCCCAGATGTTGGACGCCTCACAAACACTCTTGCCATCAGATGAGCTGAAGAAACGATTTGTTCAAGAAGGCATCTCTTTGGAAGCTCCTCTCATGACTTCTTGCGGCACTGGCGTTACAGCCTGCGTTCTTGCATTGGGTCTCCATAGAATTGGAAAATCTGAGGTTGCAGTTTATGATGGTTCTTGGACGGAATGGGGAGGGCAATCAGACACTCCGGTCGAAACTTCGCAATAG 2262 43.32 MLRLIFSSRQLLLSSQKSPVRERWNIFTSLNCSTICPTEGESVATTSDCLNDSTDLLRRWGCTDGDVARIFARRPSLRNADLNQLEQKLSLLKDLGITSPDLVKIIHCRPRFFSCRINNNFAERIDFFMTLFDSKPVLVKAIVRNPSLLTYDFHHKIKPVMALYKEMGVSKKDLILMLISRPTLIPRTSFDDEKVEYICRTGVSKDATMYKYVVTIIGISRLETIRRKVANLEKFGFTEDEIFCFFGRSPLILTLSVDKVQRNMTFILCTLKMPANVVIQHPFLLYSNLETVLKPRLKLSMKMQEMNLNLQIRGHEMLKALRMKEKRFLKAFVRSQPKEVAAELIEFYTSAKGIKRSLNFNHLQVRVTGRGGLQWWNVSQGLNSMAETRFQVGVLSLKLNAASLKLKQCIKRSIHLRAKPTSVPHKISGLVPRIMASSVAGKIVESSTQSLYANEPVVSVDWLHANLKEPELKVLDASWYMPDEQRNPIQEYQVAHIPGAIFFDLDGIADRTTKLPHMLPSGEAFAAAVSALGIQNKDGVVVYDGKGIFSAARVWWMFRVFGHERVWVLDGGLPRWRAAGYDVESSASSDAILKASAASEAIEKVYQGQAVGPITFQTKFQPHLVWGIEQVKRNIEEKSHLLIDARSKPRFDGAVPEPRKGIRSGHVPGSKCVPFPQMLDASQTLLPSDELKKRFVQEGISLEAPLMTSCGTGVTACVLALGLHRIGKSEVAVYDGSWTEWGGQSDTPVETSQ 753
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3884204 3889340 - BLOR13380 Blo04g00468 59496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00468 753 Coils Coil 628 648 - -
Blo04g00468 753 ProSitePatterns Rhodanese signature 1. 492 503 IPR001307 GO:0004792
Blo04g00468 753 ProSiteProfiles Rhodanese domain profile. 468 585 IPR001763 -
Blo04g00468 753 Gene3D - 450 592 IPR036873 -
Blo04g00468 753 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 629 752 IPR036873 -
Blo04g00468 753 SMART rhod_4 626 747 IPR001763 -
Blo04g00468 753 SMART rhod_4 458 582 IPR001763 -
Blo04g00468 753 CDD TST_Repeat_1 457 580 - -
Blo04g00468 753 ProSitePatterns Rhodanese C-terminal signature. 731 741 IPR001307 GO:0004792
Blo04g00468 753 ProSiteProfiles Rhodanese domain profile. 636 750 IPR001763 -
Blo04g00468 753 SMART mt_12 103 135 IPR003690 GO:0003690|GO:0006355
Blo04g00468 753 SMART mt_12 243 274 IPR003690 GO:0003690|GO:0006355
Blo04g00468 753 SMART mt_12 139 170 IPR003690 GO:0003690|GO:0006355
Blo04g00468 753 SMART mt_12 68 98 IPR003690 GO:0003690|GO:0006355
Blo04g00468 753 SMART mt_12 275 309 IPR003690 GO:0003690|GO:0006355
Blo04g00468 753 SMART mt_12 2 33 IPR003690 GO:0003690|GO:0006355
Blo04g00468 753 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Blo04g00468 753 Gene3D Transcription termination factor 3, mitochondrial 114 342 IPR038538 -
Blo04g00468 753 CDD TST_Repeat_2 628 742 - -
Blo04g00468 753 PANTHER BNAC02G25610D PROTEIN 450 751 - -
Blo04g00468 753 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 454 587 IPR036873 -
Blo04g00468 753 Gene3D - 623 750 IPR036873 -
Blo04g00468 753 Pfam Rhodanese-like domain 459 578 IPR001763 -
Blo04g00468 753 Pfam Rhodanese-like domain 629 742 IPR001763 -
Blo04g00468 753 PANTHER THIOSULFATE SULFERTANSFERASE 450 751 IPR045078 GO:0016783
Blo04g00468 753 Pfam mTERF 55 130 IPR003690 GO:0003690|GO:0006355
Blo04g00468 753 Pfam mTERF 118 328 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00516 Blo-Chr2:8392191 Blo04g00468 Blo-Chr4:3884204 1.02E-08 dispersed
Blo04g00468 Blo-Chr4:3884204 Blo03g01470 Blo-Chr3:41334883 8.20E-11 dispersed
Blo04g00468 Blo-Chr4:3884204 Blo07g00180 Blo-Chr7:2262853 2.39E-15 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12258 PF02536 mTERF 5.50E-28 No_clan Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00468 K01011 - tcc:18594871 592.423