Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00474 ATGGCTCCAAGTTTTGAAAACGGTAACTCGCTTTTTGACTTCGTAGTCCGAGATGGAAACGGCGTCAAAGGAATGGTGGATTCCGGCTTATCCCAGGTACCAATCAGGTACATTCAACCGCCGCAAGAGCGTATCCAGAAGAATAACGCGGCCACCCTCGACCTGCCGCCAATCGATTTTTCGAAGCTTGATGGGCCTGACCACGATGCAGTGGCCGAGAGAATAGCCAGAGCCGCCGAGACTCTTGGGTTCCTCCAAGTTATTAACCATGGCGTGCCGGTCGAATTGCTCGAGTCTCTTAAAGAAGCAGCTCATGCCTTTTTTGGACAGCCATCGGAGAAGAAGGCTGTTTATCGCAAAGGTCATAGCCCTAGCCCCACCGTGAGCTACGGTACGAGCTTTGTGCCGGAGAAGGAAAAGGCGTTGGAGTGGAAGGACTATATCAGTATGGTGTATAAAAGCGACGAGGAGGCGCTTCAGTTTTGGCCGGAACAGTGCAGGGAAGTTGCTCTCGAGTACCTCAAATCATCGCTGAAAATGGTGAGAAAATTGTTAGAAGTTCTGTTGGAAAAGCTTGAAGTGACAGTAGCTGAGTCGAAAATAGATGCTCTGATTGGTATGAAGATGGTTAACATGAACTTCTACCCAACTTGTCCCAATCCGGAACTCACAGTCGGCGTCGGGCGGCACTCAGACATGGGGACCTTAACAGTGCTGTTGCAGGACGGAATTGGTGGATTGTATGTGAAAGTTGAGGAAGACGACGTCTTGATTGGTAAGAAGGGGGAGTGGGTGGAGATCCCGCCTATTCCTGGCGCTCTCGTCATTAACATCGGCGATACGTTACAGATATTGAGCAACGGGAAGTATAAAAGTGCTGAACACAGGGTTCGAACGACGAGCAAAAAGGCTCGAGTGTCGGTTCCGATCTTCACTATACCAAAAGGGGATGAGAAGATAGGGCCGTTGCCGGAGCTGGTCGAAAAAGACGGAGTGGCTCGATACAGAGAGTTTGTATTCGCGGAGTACATGAAGAACTTCTTTGCAAATGCCCATGATGGGAAGAAGTCTCTGGATTTCGCAGCCGCCTGA 1092 50.09 MAPSFENGNSLFDFVVRDGNGVKGMVDSGLSQVPIRYIQPPQERIQKNNAATLDLPPIDFSKLDGPDHDAVAERIARAAETLGFLQVINHGVPVELLESLKEAAHAFFGQPSEKKAVYRKGHSPSPTVSYGTSFVPEKEKALEWKDYISMVYKSDEEALQFWPEQCREVALEYLKSSLKMVRKLLEVLLEKLEVTVAESKIDALIGMKMVNMNFYPTCPNPELTVGVGRHSDMGTLTVLLQDGIGGLYVKVEEDDVLIGKKGEWVEIPPIPGALVINIGDTLQILSNGKYKSAEHRVRTTSKKARVSVPIFTIPKGDEKIGPLPELVEKDGVARYREFVFAEYMKNFFANAHDGKKSLDFAAA 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3924975 3926363 + BLOR13386 Blo04g00474 59502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00474 363 Gene3D - 11 346 IPR027443 -
Blo04g00474 363 Pfam 2OG-Fe(II) oxygenase superfamily 209 312 IPR044861 -
Blo04g00474 363 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 164 IPR026992 -
Blo04g00474 363 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 2 355 - -
Blo04g00474 363 SUPERFAMILY Clavaminate synthase-like 21 355 - -
Blo04g00474 363 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 314 IPR005123 -
Blo04g00474 363 PANTHER FERULOYL COA ORTHO-HYDROXYLASE 2-LIKE 2 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00474 Blo-Chr4:3924975 Blo03g00789 Blo-Chr3:32915484 2.74E-59 dispersed
Blo04g00474 Blo-Chr4:3924975 Blo07g01376 Blo-Chr7:33877725 9.23E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00474 K23145 - pop:7480442 557.37