Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00485 ATGAAAGAGCGTCTTCCGACTATTATTCTCTCTTCCTCTCCGGATCGCCAAGTTTTCATTTCGGACAGAATGGACTTGACTCCAGCGCATTCCGACTCTGGCTCGAACTCCGTTGCCGCTGATGATTCCGATCCTTTTCCCGTTTCCGCATTTCAGATTGCAAATCAGGCGCAATTGACAAATTGGACAGATGATATGCACAGGTTATATCTTGACTCTTTAGAAGCATCATTTGTTAAAGAGTTGCATAATTCTTTGCAATTGCGAGCCTGGAGCTTTGGTAACAATGTAACTCTGATGCAAACCAACTCTCCTAATTCACGTGATAAGATTGCATTATTTTTGGGAGGTGGGAAGGTTTCATACGATAAGTTCATAAACTACTTTAACCGTGTATATCAGAAAGACAAACCCAATGCTGTGGAATGCTGTAATCTGTCAGTACACTCTGAGATCCAATCTGCATCTTTTGAGGGGAAGCTCTATCAGATGGAAAACATTGCAGAAATGGCTAGCGGTGGAGGAGAGCAGGAAACCCAAGAGGTTGCCCAGAAGAGCCTCTTGCAGAACGATGCTCTTTACGAGTATATACTGGAGACTGGTGTATATCCTAGAGAACCTGAACCCATGAAGGAGCTTAGAATGTTGACTGCCCAACATCCTTTGGGCTACATGGCAATCTCAGCTGATGGAGGCCAATTCTTAAACATGCTGTTGAAACTCATAAACGCCAAGAAGACGATGGAGATTGGCGTTTTCACCGGCTACTCCCTCCTCGCCGCAGCCCTTGCTCTTCCCCATGATGGGAAGATTTTGGCCATGGATGTGAACAAGGAAAGCTACGAACTGGGATTACCCATCATAGAAAAAGCTGGCGTTGGCCACAAGATCGACTTCAGAGAAGGACCTGCTCTTCCATTTCTCGACATTCTTCTTCAAGATGAGAAAAACTACGGAAGTTTTGATTTTGTGTTCGTCGACGCTGATAAAAGCAACTACATAAACTACCACAAGAGGATAATCGAACTGGTGAAGGTCGGAGGCGTCATTGGCTACGACAACACGTTATGGTATGGGTCAGTGGTGGCCACGCCGGAGGCACCTATGGAGGACTACGTTAGGTCTAATAGGGGGTTTGTGATTGAGTTCAACAAGGCCATTGGCGAGGACCCCAGAATAGAAATCTGCATGCTCCCCGTCGGCGATGGAATCACTATCTGCCGTCGGATTGAATGA 1236 46.04 MKERLPTIILSSSPDRQVFISDRMDLTPAHSDSGSNSVAADDSDPFPVSAFQIANQAQLTNWTDDMHRLYLDSLEASFVKELHNSLQLRAWSFGNNVTLMQTNSPNSRDKIALFLGGGKVSYDKFINYFNRVYQKDKPNAVECCNLSVHSEIQSASFEGKLYQMENIAEMASGGGEQETQEVAQKSLLQNDALYEYILETGVYPREPEPMKELRMLTAQHPLGYMAISADGGQFLNMLLKLINAKKTMEIGVFTGYSLLAAALALPHDGKILAMDVNKESYELGLPIIEKAGVGHKIDFREGPALPFLDILLQDEKNYGSFDFVFVDADKSNYINYHKRIIELVKVGGVIGYDNTLWYGSVVATPEAPMEDYVRSNRGFVIEFNKAIGEDPRIEICMLPVGDGITICRRIE 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4025084 4031097 - BLOR13397 Blo04g00485 59513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00485 411 PANTHER O-METHYLTRANSFERASE-RELATED 176 410 - -
Blo04g00485 411 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 186 410 IPR002935 GO:0008171
Blo04g00485 411 Pfam O-methyltransferase 202 410 IPR002935 GO:0008171
Blo04g00485 411 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 176 410 - -
Blo04g00485 411 Gene3D Vaccinia Virus protein VP39 176 411 IPR029063 -
Blo04g00485 411 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 190 409 IPR029063 -
Blo04g00485 411 CDD AdoMet_MTases 249 350 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00485 Blo15g00753 CCT
Blo02g00828 Blo04g00485 CCT
Blo04g00485 Blo15g00753 ECH
Blo02g00828 Blo04g00485 ECH
Blo04g00485 Blo13g00578 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00828 Blo-Chr2:29714595 Blo04g00485 Blo-Chr4:4025084 2.44E-131 dispersed
Blo04g00485 Blo-Chr4:4025084 Blo15g00753 Blo-Chr15:25660661 5.36E-134 dispersed
Blo13g00577 Blo-Chr13:27908019 Blo04g00485 Blo-Chr4:4025084 1.70E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00485 K00588 - cit:102619432 382.874